RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 C11orf74Q86VG3 221 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 C12orf50Q8NA57 414 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 HPDLQ96IR7 371 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 CBWD1Q9BRT8 395 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 IKZF4Q9H2S9 585 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 RXFP3Q9NSD7 469 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 EBF1Q9UH73 591 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 CFAP47Q6ZTR5 3102 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 EPN2O95208 641 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 HDCP19113 662 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 CASP5P51878 434 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 KCNB1Q14721 858 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 ZNF77Q15935 545 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 TRIM68Q6AZZ1 485 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 WDR49Q8IV35 697 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 CD101Q93033 1021 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 ARRDC1-AS1Q9H2J1 176 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 SMOC1Q9H4F8 434 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 SIX4Q9UIU6 781 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 ARHGAP26Q9UNA1 814 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 ATG2BQ96BY7 2078 aa19.07■□□□□ 0.64
SHKBP1-227ENST00000602011 ANK1P16157 1881 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 GOLGA8IPA6NC78 632 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 OTOL1A6NHN0 477 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 GOLGA8JA6NMD2 632 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 EIF3DO15371 548 aaKnown RBP eCLIP19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 RNF40O75150 1001 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 RHOBTB1O94844 696 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 PRPF6O94906 941 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 NFATC1O95644 943 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 WARSP23381 471 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 ACAT1P24752 427 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 GPR15P49685 360 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 WNT7BP56706 349 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 CEBPZQ03701 1054 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 CNNM4Q6P4Q7 775 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 SCN4BQ8IWT1 228 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 PANK2Q9BZ23 570 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 MTMR12Q9C0I1 747 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 PCIF1Q9H4Z3 704 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 TRPC7Q9HCX4 862 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 TRPM5Q9NZQ8 1165 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 GCNT4Q9P109 453 aa19.06■□□□□ 0.64
SHKBP1-227ENST00000602011 SLC9A3R1O14745 358 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 TRIM66O15016 1216 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 APBB3O95704 486 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 EGFP01133 1207 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 ARSAP15289 507 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 ANXA13P27216 316 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 NASPP49321 788 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 USP4Q13107 963 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 ELF2Q15723 593 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 EML3Q32P44 896 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 AASDHQ4L235 1098 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 SDHAF4Q5VUM1 108 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 DENND5BQ6ZUT9 1274 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 SYT15Q9BQS2 421 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 VPS45Q9NRW7 570 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 KBTBD4Q9NVX7 518 aa19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 CGNQ9P2M7 1197 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-227ENST00000602011 PPP6R2O75170 966 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 TACC1O75410 805 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 TADA3O75528 432 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 GNL1P36915 607 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 GRIK1P39086 918 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 NOP14P78316 857 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 PLA2G2CQ5R387 149 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 KBTBD6Q86V97 674 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 IQUBQ8NA54 791 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 STKLD1Q8NE28 680 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 ZSWIM2Q8NEG5 633 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 MYCBPAPQ8TBZ2 947 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 ZNF507Q8TCN5 953 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 SH3RF2Q8TEC5 729 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 NOC3LQ8WTT2 800 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 CHFRQ96EP1 664 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 C8orf48Q96LL4 319 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 USP28Q96RU2 1077 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 FNBP1Q96RU3 617 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 CYP2S1Q96SQ9 504 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 TTLL2Q9BWV7 592 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 MAGEF1Q9HAY2 307 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 HSPBP1Q9NZL4 362 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 RALYQ9UKM9 306 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 TSC2P49815 1807 aa19.04■□□□□ 0.64
SHKBP1-227ENST00000602011 STK38Q15208 465 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 N4BP2L1Q5TBK1 243 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 NAIF1Q69YI7 327 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 TRAPPC11Q7Z392 1133 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 ARL14EPQ8N8R7 260 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 LINC00301Q8NCQ3 95 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 KBTBD7Q8WVZ9 684 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 ZNF396Q96N95 335 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 MMS19Q96T76 1030 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 TRIM9Q9C026 710 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 SNX25Q9H3E2 840 aa19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 FBRSL1Q9HCM7 1045 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-227ENST00000602011 MTMR6Q9Y217 621 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms