RNA–Protein interactions for RNA: ENST00000601897.1

RAB11B-205, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB11B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-205ENST00000601897 HPSEQ9Y251 543 aa13.84□□□□□ -0.19
RAB11B-205ENST00000601897 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
RAB11B-205ENST00000601897 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 NOL4O94818 638 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 PRAMEF12O95522 483 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 F11P03951 625 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 FAM163BP0C2L3 166 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 HMGA1P17096 107 aaKnown RBP13.83□□□□□ -0.2
RAB11B-205ENST00000601897 NR2F2P24468 414 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 WEE1P30291 646 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SOX9P48436 509 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 IFNAR2P48551 515 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 NRLP54845 237 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 CCDC142Q17RM4 750 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SGSM1Q2NKQ1 1148 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 TDRD10Q5VZ19 366 aaKnown RBP13.83□□□□□ -0.2
RAB11B-205ENST00000601897 FAM171BQ6P995 826 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 MON1AQ86VX9 555 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 ZNF516Q92618 1163 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
RAB11B-205ENST00000601897 CLDN23Q96B33 292 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 RSPRY1Q96DX4 576 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 TRMT2BQ96GJ1 504 aaKnown RBP13.83□□□□□ -0.2
RAB11B-205ENST00000601897 PCED1BQ96HM7 432 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SLITRK1Q96PX8 696 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 TSG101Q99816 390 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 IER2Q9BTL4 223 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 ELOVL4Q9GZR5 314 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 CRTAC1Q9NQ79 661 aa13.83□□□□□ -0.2
RAB11B-205ENST00000601897 SOBPA7XYQ1 873 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 SMC2O95347 1197 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 HDCP19113 662 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 CCR3P51677 355 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 VAMP7P51809 220 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 MLLT6P55198 1093 aaPredicted RBP13.82□□□□□ -0.2
RAB11B-205ENST00000601897 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 MTAPQ13126 283 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 NR1H3Q13133 447 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 ADAM9Q13443 819 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 PON2Q15165 354 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 ZNF528Q3MIS6 628 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 FAM186BQ8IYM0 893 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 CPA6Q8N4T0 437 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 B3GALNT2Q8NCR0 500 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 SPATA17Q96L03 361 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 CEP295NLQ96MC4 621 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 RAB23Q9ULC3 237 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
RAB11B-205ENST00000601897 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 F8VP50 259 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 STAU1O95793 577 aaKnown RBP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 CTHP32929 405 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 PSMC2P35998 433 aaKnown RBP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 RAP1GAPP47736 663 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 CXCL12P48061 93 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 PPP3CCP48454 512 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 TNK2Q07912 1038 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 GRSF1Q12849 480 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 DPYDQ12882 1025 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 RUNX3Q13761 415 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 MTF1Q14872 753 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 PDGFRLQ15198 375 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 TSSK4Q6SA08 328 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 TAF4BQ92750 862 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 USP13Q92995 863 aaPredicted RBP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 MYRFLQ96LU7 910 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 PKMYT1Q99640 499 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 NACA2Q9H009 215 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 CHRDQ9H2X0 955 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 GOLPH3LQ9H4A5 285 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 EBF3Q9H4W6 596 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 SMYD3Q9H7B4 428 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 DMAC2Q9NW81 257 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 DUS2Q9NX74 493 aaKnown RBP13.81□□□□□ -0.2
RAB11B-205ENST00000601897 NCDNQ9UBB6 729 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 CCL26Q9Y258 94 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 NCANO14594 1321 aa13.81□□□□□ -0.2
RAB11B-205ENST00000601897 IKBKBO14920 756 aa13.8□□□□□ -0.2
RAB11B-205ENST00000601897 CETN3O15182 167 aa13.8□□□□□ -0.2
RAB11B-205ENST00000601897 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
RAB11B-205ENST00000601897 C4BPAP04003 597 aaKnown RBP13.8□□□□□ -0.2
RAB11B-205ENST00000601897 EPB41P11171 864 aaKnown RBP13.8□□□□□ -0.2
RAB11B-205ENST00000601897 CDH8P55286 799 aa13.8□□□□□ -0.2
RAB11B-205ENST00000601897 STIM1Q13586 685 aa13.8□□□□□ -0.2
RAB11B-205ENST00000601897 ZNF268Q14587 947 aaPredicted RBP13.8□□□□□ -0.2
RAB11B-205ENST00000601897 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
RAB11B-205ENST00000601897 LIMS2Q7Z4I7 341 aa13.8□□□□□ -0.2
RAB11B-205ENST00000601897 TMEM150AQ86TG1 271 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms