RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 USP17L7P0C7H9 530 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 TCF3P15923 654 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 WARSP23381 471 aaKnown RBP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 RAP1GAPP47736 663 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 PSMC1P62191 440 aaKnown RBP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 EHHADHQ08426 723 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 SURF1Q15526 300 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 EML3Q32P44 896 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 SHC4Q6S5L8 630 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 TRAPPC11Q7Z392 1133 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 WDR49Q8IV35 697 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 SCN4BQ8IWT1 228 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 ARL14EPQ8N8R7 260 aaPredicted RBP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 GAB3Q8WWW8 586 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 MYLPFQ96A32 169 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 P2RY13Q9BPV8 354 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 GZF1Q9H116 711 aaPredicted RBP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 DUS2Q9NX74 493 aaKnown RBP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 TFIP11Q9UBB9 837 aaKnown RBP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 TRAV19A0A0A6YYK7 116 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 ATG13O75143 517 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 TNNC2P02585 160 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 DRD1P21728 446 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 USP46P62068 366 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 AMPD2Q01433 879 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 STK38Q15208 465 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 VSTM1Q6UX27 236 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 C4orf50Q6ZRC1 276 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 CEP68Q76N32 757 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 CEP295NLQ96MC4 621 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 C7orf25Q9BPX7 421 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 LRRC27Q9C0I9 530 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 LINC00597Q9H2U6 94 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 CUEDC2Q9H467 287 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 KIAA1586Q9HCI6 787 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 AGPAT3Q9NRZ7 376 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 MAGEC2Q9UBF1 373 aaPredicted RBP19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 WNT6Q9Y6F9 365 aa19.25■□□□□ 0.67
CHMP2A-208ENST00000601220 OBSL1O75147 1896 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 SPTBN2O15020 2390 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 PDGFRBP09619 1106 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 BDNFP23560 247 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 STXBP4Q6ZWJ1 553 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 KBTBD6Q86V97 674 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 CPA6Q8N4T0 437 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 CAMKK1Q8N5S9 505 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 MYCBPAPQ8TBZ2 947 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 SH3RF2Q8TEC5 729 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 SCFD1Q8WVM8 642 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 ZNF516Q92618 1163 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 PCED1BQ96HM7 432 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 LOXL4Q96JB6 756 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 MRPL45Q9BRJ2 306 aaKnown RBP19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 TTLL2Q9BWV7 592 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 ARHGAP26Q9UNA1 814 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 SLC8A2Q9UPR5 921 aa19.24■□□□□ 0.67
CHMP2A-208ENST00000601220 K7ELQ4 463 aaPredicted RBP19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 AXIN1O15169 862 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 TACC1O75410 805 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 RPP40O75818 363 aaKnown RBP19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 CKMP06732 381 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 FAM163BP0C2L3 166 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 HDCP19113 662 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 PSMD6Q15008 389 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 SNRNP35Q16560 246 aaKnown RBP19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 GAB4Q2WGN9 574 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 FBXO43Q4G163 708 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 CACNA2D4Q7Z3S7 1137 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 FSIP1Q8NA03 581 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 RDH13Q8NBN7 331 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 CD101Q93033 1021 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 ATP2A3Q93084 1043 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 DHX58Q96C10 678 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 ZC3H10Q96K80 434 aaKnown RBP19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 CNTNAP3BQ96NU0 1288 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 CNTNAP3Q9BZ76 1288 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 TMEM30AQ9NV96 361 aa19.23■□□□□ 0.67
CHMP2A-208ENST00000601220 AKAP3O75969 853 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 EPN2O95208 641 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 GNL1P36915 607 aaPredicted RBP19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 GRIK1P39086 918 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 ASIC1P78348 528 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 AMPD3Q01432 767 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 CYP24A1Q07973 514 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 MAPRE1Q15691 268 aaKnown RBP19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 PLA2G2CQ5R387 149 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 FAM26FQ5R3K3 315 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 DENND5BQ6ZUT9 1274 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 SYT13Q7L8C5 426 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 IQUBQ8NA54 791 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 C8orf48Q96LL4 319 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 CGRRF1Q99675 332 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 RNF38Q9H0F5 515 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 ARRDC1-AS1Q9H2J1 176 aa19.22■□□□□ 0.67
CHMP2A-208ENST00000601220 ZNF840PA6NDX5 716 aa19.21■□□□□ 0.67
CHMP2A-208ENST00000601220 TM4SF5O14894 197 aa19.21■□□□□ 0.67
CHMP2A-208ENST00000601220 CLIC2O15247 247 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms