RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 MTUS1Q9ULD2 1270 aa23.33■■□□□ 1.33
SNRNP70-209ENST00000601065 LZTS1Q9Y250 596 aa23.33■■□□□ 1.33
SNRNP70-209ENST00000601065 CDY1Q9Y6F8 540 aa23.33■■□□□ 1.33
SNRNP70-209ENST00000601065 PTPRDP23468 1912 aa23.33■■□□□ 1.32
SNRNP70-209ENST00000601065 MYH10P35580 1976 aa23.33■■□□□ 1.32
SNRNP70-209ENST00000601065 ANKRD62A6NC57 917 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 PDE4CQ08493 712 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 C4orf50Q6ZRC1 276 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 MON1BQ7L1V2 547 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 GPR65Q8IYL9 337 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 SLC35F5Q8WV83 523 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 ALG13Q9NP73 1137 aaKnown RBP23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 KRT82Q9NSB4 513 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 INTUQ9ULD6 942 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 CDH23Q9H251 3354 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 TULP2O00295 520 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 CTSAP10619 480 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 NPR3P17342 541 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 ABCB4P21439 1286 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 TAP1Q03518 808 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 PDCLQ13371 301 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 NFE2Q16621 373 aaPredicted RBP23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 DNTTIP2Q5QJE6 756 aaKnown RBP23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 CLEC20AQ6ZU45 233 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 MCOLN2Q8IZK6 566 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 SMARCD1Q96GM5 515 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 TGS1Q96RS0 853 aaKnown RBP23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 RHOBTB2Q9BYZ6 727 aa23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 MRPL17Q9NRX2 175 aaKnown RBP23.32■■□□□ 1.32
SNRNP70-209ENST00000601065 MACROD2A1Z1Q3 448 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 CAPN15O75808 1086 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 RB1P06400 928 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 FAM200BP0CF97 657 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 SETSIPP0DME0 302 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 CPB1P15086 417 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 RPL17P18621 184 aaKnown RBP23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 MMP8P22894 467 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 DNAJB2P25686 324 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 ARPP19P56211 112 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 GPR17Q13304 367 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 SPATA2LQ8IUW3 424 aaPredicted RBP23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 AUTS2Q8WXX7 1259 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 SAMD11Q96NU1 681 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 CLSTN3Q9BQT9 956 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 THAP2Q9H0W7 228 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 PAXBP1Q9Y5B6 917 aa23.31■■□□□ 1.32
SNRNP70-209ENST00000601065 ADAM12O43184 909 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 KIF5CO60282 957 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 LILRB3O75022 631 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 AP1G2O75843 785 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 BEST1O76090 585 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 TMEM253P0C7T8 217 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 BDNFP23560 247 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 ERVK-21P61565 698 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 PTP4A2Q12974 167 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 RAB30Q15771 203 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 CFAP221Q4G0U5 840 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 PTPN20Q4JDL3 420 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 C2CD6Q53TS8 623 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 PMF1Q6P1K2 205 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 ERICH1Q86X53 443 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 SPPL3Q8TCT6 385 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 FUBP3Q96I24 572 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 VCPIP1Q96JH7 1222 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 NOX5Q96PH1 765 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 CPXM1Q96SM3 734 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 C11orf70Q9BRQ4 267 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 C11orf84Q9BUA3 381 aaPredicted RBP23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 TMEM30AQ9NV96 361 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 ADAM22Q9P0K1 906 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 MSRAQ9UJ68 235 aa23.3■■□□□ 1.32
SNRNP70-209ENST00000601065 XPO1O14980 1071 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 OR1D2P34982 312 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 PLA2G4AP47712 749 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 CACNA2D1P54289 1103 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 SLC8A3P57103 927 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 GNG11P61952 73 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 ETF1P62495 437 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 ROR1Q01973 937 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 C1QBPQ07021 282 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 MMS22LQ6ZRQ5 1243 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 STK32AQ8WU08 396 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 CTNNBL1Q8WYA6 563 aaPredicted RBP23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 PGLYRP2Q96PD5 576 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 PRO3102Q9H379 93 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 CSNK1G1Q9HCP0 422 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 ABI2Q9NYB9 513 aaPredicted RBP23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 SALL4Q9UJQ4 1053 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 WDR27A2RRH5 827 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 KIF2AO00139 706 aaPredicted RBP23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 MAP3K7CLP57077 242 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 UBE3AQ05086 875 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 SMARCB1Q12824 385 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 RNF19BQ6ZMZ0 732 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 POF1BQ8WVV4 589 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 SMOQ99835 787 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 NKX2-4Q9H2Z4 354 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 ST7Q9NRC1 585 aa23.29■■□□□ 1.32
SNRNP70-209ENST00000601065 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.29■■□□□ 1.323e-21■■■□□ 15.8
SNRNP70-209ENST00000601065 SSX2IPQ9Y2D8 614 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms