RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 TSPY1Q01534 308 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 RAPGEF1Q13905 1077 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 STILQ15468 1287 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 PSMD5Q16401 504 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 ARHGAP44Q17R89 818 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CTXN3Q4LDR2 81 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CWF19L1Q69YN2 538 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 TMEM270Q6UE05 265 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 TMC7Q7Z402 723 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CNGA4Q8IV77 575 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 DRC7Q8IY82 874 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 SLC4A11Q8NBS3 891 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CASP10Q92851 521 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 TMEM176AQ96HP8 235 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 TWNKQ96RR1 684 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 DNAJC7Q99615 494 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 ZCWPW1Q9H0M4 648 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 NLRC4Q9NPP4 1024 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 PCDHB4Q9Y5E5 795 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 PATJQ8NI35 1801 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CACNA1IQ9P0X4 2223 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 CXCL14O95715 111 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 VDRP11473 427 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 FERP16591 822 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 CD58P19256 250 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 LMO2P25791 158 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 CASP14P31944 242 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 GPR17Q13304 367 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 RAB33AQ14088 237 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 RARS2Q5T160 578 aaKnown RBP12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 ARHGAP17Q68EM7 881 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 RBBP8NLQ8NC74 664 aaPredicted RBP12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 MYCBPAPQ8TBZ2 947 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 ANP32BQ92688 251 aaKnown RBP12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 FUBP3Q96I24 572 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 PDLIM2Q96JY6 352 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 SYT15Q9BQS2 421 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 CLSTN3Q9BQT9 956 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 ELOVL4Q9GZR5 314 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 HMGXB4Q9UGU5 601 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 MYH10P35580 1976 aa12.37□□□□□ -0.43
CHMP2A-207ENST00000600804 LRRC53A6NM62 1247 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 AKR1B15C9JRZ8 316 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 RNF225M0QZC1 329 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 MFAP3LO75121 409 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 ABLIM3O94929 683 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 PTPN1P18031 435 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 CLCN1P35523 988 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 KRT9P35527 623 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 NUBP1P53384 320 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 CDK17Q00537 523 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 PTK2Q05397 1052 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 CFAP221Q4G0U5 840 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 SFMBT2Q5VUG0 894 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 IRF2BP2Q7Z5L9 587 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 ZNF677Q86XU0 584 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 UBALD2Q8IYN6 164 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 OR8K1Q8NGG5 319 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 ZNF461Q8TAF7 563 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 SLC22A17Q8WUG5 538 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 B3GALT6Q96L58 329 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 EMILIN2Q9BXX0 1053 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 CRTAC1Q9NQ79 661 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 AFF4Q9UHB7 1163 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 NR2E1Q9Y466 385 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 BZW2Q9Y6E2 419 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 CDY1Q9Y6F8 540 aa12.36□□□□□ -0.43
CHMP2A-207ENST00000600804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 GOLGA6L6A8MZA4 724 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 TEX28O15482 410 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 CYP26A1O43174 497 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 PI15O43692 258 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ADH1AP07327 375 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 KRT5P13647 590 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 NPR3P17342 541 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 FECHP22830 423 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ANXA13P27216 316 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 GNA15P30679 374 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 GSDMDP57764 484 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ROR1Q01973 937 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 ITIH3Q06033 890 aa12.35□□□□□ -0.43
CHMP2A-207ENST00000600804 CNGA2Q16280 664 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms