RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 UTP4Q969X6 686 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 ZBTB10Q96DT7 871 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 C12orf65Q9H3J6 166 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 TNNC2P02585 160 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 ERBB2P04626 1255 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 EEF1DP3Q658K8 133 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 METTL7BQ6UX53 244 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 RPAINQ86UA6 219 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 FAM71DQ8N9W8 422 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 TRAPPC12Q8WVT3 735 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 NLRP4Q96MN2 994 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 PAFAH2Q99487 392 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 SYNCQ9H7C4 482 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 HMGXB4Q9UGU5 601 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 EFR3BQ9Y2G0 817 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 ANK1P16157 1881 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 A0A1B0GUA9 196 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 GOLGA8RI6L899 631 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 ARIH2O95376 493 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 EDNRBP24530 442 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 ADRA1DP25100 572 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 RASA2Q15283 850 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 HADHQ16836 314 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 HSDL1Q3SXM5 330 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 MPZL3Q6UWV2 235 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 OTOAQ7RTW8 1153 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 XYLT1Q86Y38 959 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 TRPM4Q8TD43 1214 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 NSMCE1Q8WV22 266 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 HSPH1Q92598 858 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 ZNF75CPQ92670 426 aaPredicted RBP21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 ANKRD36BP1Q96IX9 119 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 KLF6Q99612 283 aaPredicted RBP21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 SDCBP2Q9H190 292 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 R3HDMLQ9H3Y0 253 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 PPCSQ9HAB8 311 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 TXLNGQ9NUQ3 528 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 HAO1Q9UJM8 370 aa21.21■□□□□ 0.99
SHKBP1-225ENST00000600733 WDR91A4D1P6 747 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 INO80B-WBP1J3KQ70 363 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 NDC80O14777 642 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 CXCL8P10145 99 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 PHBP35232 272 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 RAD23BP54727 409 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 MXD4Q14582 209 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 SURF1Q15526 300 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 TMEM132AQ24JP5 1023 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 BBS9Q3SYG4 887 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 ATF7IP2Q5U623 682 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 LBX2Q6XYB7 198 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 RFX6Q8HWS3 928 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 KCTD6Q8NC69 237 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 C10orf82Q8WW14 230 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 TWNKQ96RR1 684 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 INO80BQ9C086 356 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 LHX5Q9H2C1 402 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 SSC5DA1L4H1 1573 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 PROZP22891 400 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 TAZQ16635 292 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 NCAPG2Q86XI2 1143 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 APOBEC3FQ8IUX4 373 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 TTC13Q8NBP0 860 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 FNIP1Q8TF40 1166 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 ACSS3Q9H6R3 686 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 PTPRHQ9HD43 1115 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 GGA3Q9NZ52 723 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 XPO7Q9UIA9 1087 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 SIX4Q9UIU6 781 aa21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 ZMYND8Q9ULU4 1186 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-225ENST00000600733 WDR90Q96KV7 1748 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 B4GALT4O60513 344 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 MIPP30301 263 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 BASP1P80723 227 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 SYCP2LQ5T4T6 812 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 ADGRD1Q6QNK2 874 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 TSHZ1Q6ZSZ6 1077 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 CALN1Q9BXU9 219 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 MAF1Q9H063 256 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 SMYD3Q9H7B4 428 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 C15orf41Q9Y2V0 281 aa21.19■□□□□ 0.98
SHKBP1-225ENST00000600733 MED7O43513 233 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 CCND1P24385 295 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 GBP2P32456 591 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 EIF3EP60228 445 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 ZNF667Q5HYK9 610 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 DEFB132Q7Z7B7 95 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 PALM2Q8IXS6 379 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 MZB1Q8WU39 189 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 CNKSR2Q8WXI2 1034 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 FAM167AQ96KS9 214 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 DHRS4Q9BTZ2 278 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 E7ESA3 106 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 ZWINTO95229 277 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 NFICP08651 508 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 MMRN1Q13201 1228 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 ZNF449Q6P9G9 518 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 TCP10LQ8TDR4 215 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 LRMDAQ9H2I8 198 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 MINDY3Q9H8M7 445 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms