RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	EPHA5	P54756	1037 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	ORC1	Q13415	861 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	STIL	Q15468	1287 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	SGO2	Q562F6	1265 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	LMO3	Q8TAP4	145 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	MRPS31	Q92665	395 aa	Known RBP	13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	FGF13	Q92913	245 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	NECAB3	Q96P71	396 aa	Predicted RBP	13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	HNRNPAB	Q99729	332 aa	Known RBP	13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	ZNF518B	Q9C0D4	1074 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	VPS16	Q9H269	839 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	ATXN3L	Q9H3M9	355 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	IGSF9	Q9P2J2	1179 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	EPS15L1	Q9UBC2	864 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	SLC38A8	A6NNN8	435 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523		F8VP50	259 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	TNFRSF10A	O00220	468 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	NOL4	O94818	638 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	VDR	P11473	427 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	LAMP2	P13473	410 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	ALAD	P13716	330 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	PON1	P27169	355 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	ADORA2B	P29275	332 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	USP8	P40818	1118 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	PPP3CC	P48454	512 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	PDE6C	P51160	858 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	COPB1	P53618	953 aa	Known RBP	13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	RAD23B	P54727	409 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	MIIP	Q5JXC2	388 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	HS6ST3	Q8IZP7	471 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	FUK	Q8N0W3	1084 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	NUP93	Q8N1F7	819 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	C12orf29	Q8N999	325 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	GPR152	Q8TDT2	470 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	ING5	Q8WYH8	240 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	TRMT2B	Q96GJ1	504 aa	Known RBP	13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	SLITRK1	Q96PX8	696 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	COMMD8	Q9NX08	183 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	LIMD1	Q9UGP4	676 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	HMGXB4	Q9UGU5	601 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	LIMA1	Q9UHB6	759 aa	Known RBP	13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	DAAM1	Q9Y4D1	1078 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	NME7	Q9Y5B8	376 aa		13.79	□□□□□ -0.2
SRRM1-223	ENST00000600523	TCF20	Q9UGU0	1960 aa	Known RBP	13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523		A0A1W2PRU2	124 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	SOBP	A7XYQ1	873 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	CLDN5	O00501	218 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	MED7	O43513	233 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	SLC9A1	P19634	815 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	DDX6	P26196	483 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	YWHAQ	P27348	245 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	UBXN1	Q04323	297 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	ARHGAP44	Q17R89	818 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	CCDC142	Q17RM4	750 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	SDHAF4	Q5VUM1	108 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	ARHGAP17	Q68EM7	881 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	PHLDB3	Q6NSJ2	640 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	RNF135	Q8IUD6	432 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	ARHGEF19	Q8IW93	802 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	NPAS3	Q8IXF0	933 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	SLC4A11	Q8NBS3	891 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	PDZD8	Q8NEN9	1154 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	ITFG1	Q8TB96	612 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	WHAMM	Q8TF30	809 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	E2F7	Q96AV8	911 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	MCRS1	Q96EZ8	462 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	MYRFL	Q96LU7	910 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	TWNK	Q96RR1	684 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	MYADM	Q96S97	322 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	FUCA2	Q9BTY2	467 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	FBXO44	Q9H4M3	255 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	TRPM5	Q9NZQ8	1165 aa		13.78	□□□□□ -0.2
SRRM1-223	ENST00000600523	PRUNE2	Q8WUY3	3088 aa		13.77	□□□□□ -0.2
SRRM1-223	ENST00000600523	LGALS16	A8MUM7	142 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	DPYSL4	O14531	572 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	REV3L	O60673	3130 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	SERPINC1	P01008	464 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	TPM3	P06753	285 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	NPR3	P17342	541 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	CEBPB	P17676	345 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	GPR15	P49685	360 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	MAP3K7CL	P57077	242 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	BPIFB4	P59827	614 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	IFRD2	Q12894	506 aa	Predicted RBP	13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	MTMR3	Q13615	1198 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	NCAPH	Q15003	741 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	TEAD2	Q15562	447 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	SLC5A9	Q2M3M2	681 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	PRSS36	Q5K4E3	855 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	TMC8	Q8IU68	726 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	DHX40	Q8IX18	779 aa	Known RBP	13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	STKLD1	Q8NE28	680 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	SHKBP1	Q8TBC3	707 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	TCEAL4	Q96EI5	215 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	LSM14B	Q9BX40	385 aa	Known RBP	13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	DUSP16	Q9BY84	665 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	TSPY26P	Q9H489	355 aa		13.77	□□□□□ -0.21
SRRM1-223	ENST00000600523	TASP1	Q9H6P5	420 aa		13.77	□□□□□ -0.21

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