RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CCDC169A6NNP5 214 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 ATXN1LP0C7T5 689 aaKnown RBP19.03■□□□□ 0.64
SSBP4-207ENST00000600244 CXCL8P10145 99 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 RPA1P27694 616 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 PEX3P56589 373 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 NR5A1Q13285 461 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 PCSK4Q6UW60 755 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 GALNT15Q8N3T1 639 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 TRIML1Q8N9V2 468 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 SH3RF2Q8TEC5 729 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 LRRC15Q8TF66 581 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-207ENST00000600244 GCNT4Q9P109 453 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 STK24Q9Y6E0 443 aa19.03■□□□□ 0.64
SSBP4-207ENST00000600244 IGHV1OR15-9A0A0B4J2B8 117 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 NEMFO60524 1076 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 CSH1P0DML2 217 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 CSH2P0DML3 217 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 PAX3P23760 479 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 SLC6A11P48066 632 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 CFHR1Q03591 330 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 ZC2HC1CQ53FD0 456 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-207ENST00000600244 DBX2Q6ZNG2 339 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 STKLD1Q8NE28 680 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 TTC16Q8NEE8 873 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 ZNF419Q96HQ0 510 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-207ENST00000600244 ZDHHC5Q9C0B5 715 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 TMEM60Q9H2L4 133 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 FAM124BQ9H5Z6 455 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-207ENST00000600244 MAGED2Q9UNF1 606 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-207ENST00000600244 KNTC1P50748 2209 aa19.02■□□□□ 0.64
SSBP4-207ENST00000600244 MYO18AQ92614 2054 aaKnown RBP19.02■□□□□ 0.63
SSBP4-207ENST00000600244 STK36Q9NRP7 1315 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 TRAV19A0A0A6YYK7 116 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 CAPN8A6NHC0 703 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 E9PAM4 449 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 CAPN9O14815 690 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 TOM1L1O75674 476 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 KAT7O95251 611 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 CKMP06732 381 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 GABRG2P18507 467 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 GPR15P49685 360 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 GRIK2Q13002 908 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 NOLC1Q14978 699 aaKnown RBP eCLIP19.01■□□□□ 0.63
SSBP4-207ENST00000600244 CPLX2Q6PUV4 134 aaKnown RBP19.01■□□□□ 0.63
SSBP4-207ENST00000600244 DAW1Q8N136 415 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 SETD7Q8WTS6 366 aaKnown RBP19.01■□□□□ 0.63
SSBP4-207ENST00000600244 MYRFLQ96LU7 910 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 HSPA12BQ96MM6 686 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 PNMA5Q96PV4 448 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 PNKPQ96T60 521 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 PI4K2AQ9BTU6 479 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 CLMPQ9H6B4 373 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 TRPC7Q9HCX4 862 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 ZDHHC4Q9NPG8 344 aa19.01■□□□□ 0.63
SSBP4-207ENST00000600244 ABI2Q9NYB9 513 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-207ENST00000600244 RBM19Q9Y4C8 960 aaKnown RBP19.01■□□□□ 0.63
SSBP4-207ENST00000600244 COL6A6A6NMZ7 2263 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 TSC2P49815 1807 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 FAM149AA5PLN7 773 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 MYMKA6NI61 221 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 NOL4O94818 638 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 CYP17A1P05093 508 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 CLTAP09496 248 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 ZNF883P0CG24 379 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 XBP1P17861 261 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 EIF2S3P41091 472 aaKnown RBP19■□□□□ 0.63
SSBP4-207ENST00000600244 EIF2DP41214 584 aaKnown RBP19■□□□□ 0.63
SSBP4-207ENST00000600244 ZXDBP98169 803 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 MCL1Q07820 350 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 ANKRD1Q15327 319 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 ADGRG2Q8IZP9 1017 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 ARL14EPQ8N8R7 260 aaPredicted RBP19■□□□□ 0.63
SSBP4-207ENST00000600244 TRMT2BQ96GJ1 504 aaKnown RBP19■□□□□ 0.63
SSBP4-207ENST00000600244 HNRNPABQ99729 332 aaKnown RBP19■□□□□ 0.63
SSBP4-207ENST00000600244 BHMT2Q9H2M3 363 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 CALCOCO1Q9P1Z2 691 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 SUSD2Q9UGT4 822 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 ARHGAP26Q9UNA1 814 aa19■□□□□ 0.63
SSBP4-207ENST00000600244 TNFRSF4P43489 277 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 SMAD1Q15797 465 aaKnown RBP18.99■□□□□ 0.63
SSBP4-207ENST00000600244 ECM1Q16610 540 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 SDHAF4Q5VUM1 108 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 SPATA1Q5VX52 437 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 SPATA18Q8TC71 538 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 FCRL3Q96P31 734 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-207ENST00000600244 CDC6Q99741 560 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 HAPLN2Q9GZV7 340 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 KMT5AQ9NQR1 393 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 TMLHEQ9NVH6 421 aa18.99■□□□□ 0.63
SSBP4-207ENST00000600244 UXTQ9UBK9 157 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-207ENST00000600244 LACTBL1A8MY62 500 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 PIRO00625 290 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 XPOTO43592 962 aaKnown RBP18.98■□□□□ 0.63
SSBP4-207ENST00000600244 APODP05090 189 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 ADRB2P07550 413 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 MUTP22033 750 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 C12orf40Q86WS4 652 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 RGL4Q8IZJ4 473 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 THEM5Q8N1Q8 247 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms