RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 PIWIL1Q96J94 861 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 SNX27Q96L92 541 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 TUBGCP4Q9UGJ1 667 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 E5RJQ4 531 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 CST8O60676 142 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 PFKMP08237 780 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 CYP2C9P11712 490 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 GPS1Q13098 491 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 CCDC38Q502W7 563 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 OLFML2BQ68BL8 750 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 SLC35B2Q8TB61 432 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 CCHCR1Q8TD31 782 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 C18orf25Q96B23 403 aaPredicted RBP22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 C9orf72Q96LT7 481 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 KIAA1257Q9ULG3 409 aa22.73■■□□□ 1.23
GRAMD1A-212ENST00000600231 TULP2O00295 520 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 DNALI1O14645 258 aaPredicted RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 RNF8O76064 485 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 CHN1P15882 459 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 ZBTB6Q15916 424 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 MORN1Q5T089 497 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 SH3PXD2AQ5TCZ1 1133 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 ACTL9Q8TC94 416 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 IPO4Q8TEX9 1081 aaKnown RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 EFR3BQ9Y2G0 817 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 MBLAC1A4D2B0 266 aaPredicted RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 ITGAVP06756 1048 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 DARSP14868 501 aaKnown RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 CDR1P51861 262 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 PPP1R26Q5T8A7 1209 aaPredicted RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 TRNP1Q6NT89 227 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 NOTUMQ6P988 496 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 TLK2Q86UE8 772 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 ZCCHC9Q8N567 271 aaKnown RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 RBM15Q96T37 977 aaKnown RBP eCLIP22.72■■□□□ 1.234e-9■■■■■ 35.7
GRAMD1A-212ENST00000600231 NXF3Q9H4D5 531 aaKnown RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 FAM124BQ9H5Z6 455 aaPredicted RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 USP18Q9UMW8 372 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 NME7Q9Y5B8 376 aa22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 TRIP12Q14669 1992 aaPredicted RBP22.72■■□□□ 1.23
GRAMD1A-212ENST00000600231 SMIM35A0A1B0GVV1 85 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 SGK1O00141 431 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 TRIM66O15016 1216 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 IFNB1P01574 187 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 OTUD4Q01804 1114 aaKnown RBP22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 MAP2K5Q13163 448 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 TAZQ16635 292 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 OR6B2Q6IFH4 312 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 ACOT1Q86TX2 421 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 KCTD6Q8NC69 237 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 CMASQ8NFW8 434 aaPredicted RBP22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 DNAJB3Q8WWF6 145 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 STMN4Q9H169 189 aaPredicted RBP22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 C10orf88Q9H8K7 445 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 DERAQ9Y315 318 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 FAM169AQ9Y6X4 670 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 RGS7P49802 495 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 ZNF143P52747 638 aaPredicted RBP22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 YARSP54577 528 aaKnown RBP22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 CDC42EP1Q00587 391 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 RAB6CQ53S08 254 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 ERMARDQ5T6L9 678 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 FAM183BPQ6ZVS7 135 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 BBS12Q6ZW61 710 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 B4GALNT4Q76KP1 1039 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 EXOC3L1Q86VI1 746 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 RELL1Q8IUW5 271 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 TMEM40Q8WWA1 233 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 HSPH1Q92598 858 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 SERPINB12Q96P63 405 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 APOL6Q9BWW8 343 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 RAB6CQ9H0N0 254 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 CTNNAL1Q9UBT7 734 aa22.71■■□□□ 1.23
GRAMD1A-212ENST00000600231 GRAP2O75791 330 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 TRUB2O95900 331 aaKnown RBP22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 ZNF865P0CJ78 1059 aaPredicted RBP22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 AKAP5P24588 427 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 PDE4CQ08493 712 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 MFSD10Q14728 455 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 ACAP1Q15027 740 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 GOLGA7BQ2TAP0 167 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 APBB1IPQ7Z5R6 666 aaPredicted RBP22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 XPO6Q96QU8 1125 aaKnown RBP22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 TRIM6Q9C030 488 aaPredicted RBP22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 RRAGCQ9HB90 399 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 FAM49BQ9NUQ9 324 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 ASNSD1Q9NWL6 643 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 GJD2Q9UKL4 321 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 TPX2Q9ULW0 747 aaKnown RBP22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 RECQL4O94761 1208 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 CCL14Q16627 93 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 CHADLQ6NUI6 762 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 PMF1Q6P1K2 205 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 RXFP2Q8WXD0 754 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 CENPTQ96BT3 561 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 PEBP4Q96S96 227 aa22.7■■□□□ 1.22
GRAMD1A-212ENST00000600231 C2CD4BA6NLJ0 364 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 PDGFRAP16234 1089 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 MAGEA4P43358 317 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms