RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SMYD5Q6GMV2 418 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 TMEM270Q6UE05 265 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 ENOSF1Q7L5Y1 443 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 FAM35AQ86V20 835 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 GAS2L3Q86XJ1 694 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 STKLD1Q8NE28 680 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 GIPC2Q8TF65 315 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 C8orf48Q96LL4 319 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 RIPOR3Q96MK2 946 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 NECTIN4Q96NY8 510 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 SEPT5Q99719 369 aaPredicted RBP14.6□□□□□ -0.07
VRK3-219ENST00000600137 ZNF334Q9HCZ1 680 aaPredicted RBP14.6□□□□□ -0.07
VRK3-219ENST00000600137 FAM49BQ9NUQ9 324 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 DNAJC12Q9UKB3 198 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 ASB3Q9Y575 518 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 PCDHB4Q9Y5E5 795 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 FHOD1Q9Y613 1164 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 DENND4CQ5VZ89 1909 aa14.6□□□□□ -0.07
VRK3-219ENST00000600137 ZNF638Q14966 1978 aaKnown RBP14.6□□□□□ -0.07
VRK3-219ENST00000600137 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 HHLA1C9JL84 531 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 F8VP50 259 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 FOXN3O00409 490 aaPredicted RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 PES1O00541 588 aaKnown RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 TNFRSF10BO14763 440 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 XYLBO75191 536 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 RHOP08100 348 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 PAEPP09466 180 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 UCHL3P15374 230 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 ALDH1A3P47895 512 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 EPHB3P54753 998 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 MFAP3P55082 362 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 YWHAEP62258 255 aaKnown RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 FANCCQ00597 558 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 UBXN1Q04323 297 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 SYCP1Q15431 976 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 PKDCCQ504Y2 493 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 GAREM2Q75VX8 874 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 TMEM150AQ86TG1 271 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 RBBP8NLQ8NC74 664 aaPredicted RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 ITFG1Q8TB96 612 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 TCEAL4Q96EI5 215 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 SPATA17Q96L03 361 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 ZNF512Q96ME7 567 aaPredicted RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 HEXIM2Q96MH2 286 aaKnown RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 PHF7Q9BWX1 381 aaPredicted RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 LSM14BQ9BX40 385 aaKnown RBP14.59□□□□□ -0.07
VRK3-219ENST00000600137 ACP6Q9NPH0 428 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 IL37Q9NZH6 218 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 MYH10P35580 1976 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 CLUHO75153 1309 aa14.59□□□□□ -0.07
VRK3-219ENST00000600137 MYO10Q9HD67 2058 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 SLC38A8A6NNN8 435 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 LOC730098B7Z3J9 87 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 O00370 1275 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 F11P03951 625 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 PNMA6AP0CW24 399 aaPredicted RBP14.58□□□□□ -0.08
VRK3-219ENST00000600137 VDRP11473 427 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 CLCN1P35523 988 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 PBX1P40424 430 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 USP46P62068 366 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 RPL10AP62906 217 aaKnown RBP14.58□□□□□ -0.08
VRK3-219ENST00000600137 ZP2Q05996 745 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 PLD1Q13393 1074 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 ARHGAP44Q17R89 818 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 TJAP1Q5JTD0 557 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 CLEC20AQ6ZU45 233 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 TTC30AQ86WT1 665 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 SCN4BQ8IWT1 228 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 ANKRD20A12PQ8NF67 263 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 FAM81BQ96LP2 452 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 MYRFLQ96LU7 910 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 CEP295NLQ96MC4 621 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 MYADMQ96S97 322 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 CORO1BQ9BR76 489 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 PIDD1Q9HB75 910 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 CD320Q9NPF0 282 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 KIAA1257Q9ULG3 409 aa14.58□□□□□ -0.08
VRK3-219ENST00000600137 OBSL1O75147 1896 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 ANAPC1Q9H1A4 1944 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 AP5Z1O43299 807 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 AP1G2O75843 785 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 ADORA2BP29275 332 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 GRIK1P39086 918 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 JAM2P57087 298 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 DRAP1Q14919 205 aaPredicted RBP14.57□□□□□ -0.08
VRK3-219ENST00000600137 CNGA2Q16280 664 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 PABPC1LQ4VXU2 614 aaKnown RBP14.57□□□□□ -0.08
VRK3-219ENST00000600137 FKBP15Q5T1M5 1219 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 ADHFE1Q8IWW8 467 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 FAM71AQ8IYT1 594 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 SHKBP1Q8TBC3 707 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 SMARCD1Q96GM5 515 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 MED10Q9BTT4 135 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 TTLL2Q9BWV7 592 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 DUSP16Q9BY84 665 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 STK33Q9BYT3 514 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 RBSNQ9H1K0 784 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms