RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 SLC44A4Q53GD3 710 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 INTS6LQ5JSJ4 861 aaKnown RBP13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 TDRD10Q5VZ19 366 aaKnown RBP13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 C4orf50Q6ZRC1 276 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 LIMS2Q7Z4I7 341 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 DTWD2Q8NBA8 298 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 CEP295NLQ96MC4 621 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 TUBGCP2Q9BSJ2 902 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 OBSL1O75147 1896 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 TICRRQ7Z2Z1 1910 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 A0A1W2PRU2 124 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 KANSL1LA0AUZ9 987 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 NCAM2O15394 837 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 VNN1O95497 513 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 CSH1P0DML2 217 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 CSH2P0DML3 217 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 GLULP15104 373 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 CDK11BP21127 795 aaKnown RBP13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 FCARP24071 287 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 GABRR2P28476 465 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 FMO5P49326 533 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 TNNC1P63316 161 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 TRPC3Q13507 836 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 SOWAHAQ2M3V2 549 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 CFAP221Q4G0U5 840 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 C1orf228Q6PIY5 440 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 SV2AQ7L0J3 742 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 MFSD6LQ8IWD5 586 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 YAF2Q8IY57 180 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 TTC9BQ8N6N2 239 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 PJA1Q8NG27 643 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 DDX23Q9BUQ8 820 aaKnown RBP13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 ATXN3LQ9H3M9 355 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 OBP2AQ9NY56 170 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 CDH9Q9ULB4 789 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 WDFY4Q6ZS81 3184 aa13.67□□□□□ -0.22
SH2D3A-208ENST00000599563 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 DPYSL4O14531 572 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 TEX33O43247 280 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 PHACTR2O75167 634 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 TACC1O75410 805 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 SOAT2O75908 522 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 ATF6P18850 670 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 WARSP23381 471 aaKnown RBP13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 MAGEA11P43364 429 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 MRE11P49959 708 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 MXI1P50539 228 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 FANCCQ00597 558 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 ENPEPQ07075 957 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 ZACNQ401N2 412 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 ZNF852Q6ZMS4 543 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 GAREM2Q75VX8 874 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 SPATA2LQ8IUW3 424 aaPredicted RBP13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 MSANTD3Q96H12 275 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 ZSWIM3Q96MP5 696 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 MMS19Q96T76 1030 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 SYT15Q9BQS2 421 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 BCO2Q9BYV7 579 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 TASP1Q9H6P5 420 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
SH2D3A-208ENST00000599563 COL4A2P08572 1712 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 PATJQ8NI35 1801 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 H0Y858 1186 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 ZNF263O14978 683 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 PI15O43692 258 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 P4HA1P13674 534 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 GJA1P17302 382 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 ACAT1P24752 427 aaKnown RBP13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 TPM4P67936 248 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 APBA1Q02410 837 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 BIRC3Q13489 604 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 GPR158Q5T848 1215 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 FAM171BQ6P995 826 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 VITQ6UXI7 678 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 TPRG1Q6ZUI0 275 aa13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 ST13P5Q8NFI4 369 aaPredicted RBP13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 TRMT2BQ96GJ1 504 aaKnown RBP13.65□□□□□ -0.22
SH2D3A-208ENST00000599563 PKMYT1Q99640 499 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms