RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 YEATS4O95619 227 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 CKMP06732 381 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 DLATP10515 647 aaKnown RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 BDNFP23560 247 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 CNR2P34972 360 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 GALK1P51570 392 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 FAM160A1Q05DH4 1040 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 SNRNP35Q16560 246 aaKnown RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 TRAPPC11Q7Z392 1133 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 NELFCDQ8IXH7 590 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 ARL14EPQ8N8R7 260 aaPredicted RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 IQUBQ8NA54 791 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 CCDC127Q96BQ5 260 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 MMS19Q96T76 1030 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 MRPL45Q9BRJ2 306 aaKnown RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 AGPAT3Q9NRZ7 376 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 MAGEC2Q9UBF1 373 aaPredicted RBP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 CDH9Q9ULB4 789 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 NME7Q9Y5B8 376 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 WNT6Q9Y6F9 365 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 ATG2BQ96BY7 2078 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 ANAPC1Q9H1A4 1944 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 SPAG17Q6Q759 2223 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 GREB1Q4ZG55 1949 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-204ENST00000598452 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 DCDC2BA2VCK2 349 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 WARSP23381 471 aaKnown RBP20.2■□□□□ 0.82
SNRPA-204ENST00000598452 HOXA6P31267 233 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 GJA4P35212 333 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 GRIK1P39086 918 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 MAGEA11P43364 429 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 CYP2J2P51589 502 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 USP46P62068 366 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 CYP27A1Q02318 531 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 PDGFRLQ15198 375 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 ZNF77Q15935 545 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 C4orf50Q6ZRC1 276 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 CEP68Q76N32 757 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 FAM160A2Q8N612 972 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-204ENST00000598452 SCFD1Q8WVM8 642 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 C7orf25Q9BPX7 421 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 BLZF1Q9H2G9 400 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 ECT2Q9H8V3 914 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 MAGEF1Q9HAY2 307 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 SEMA4GQ9NTN9 838 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 DUS2Q9NX74 493 aaKnown RBP20.2■□□□□ 0.82
SNRPA-204ENST00000598452 GCNT4Q9P109 453 aa20.2■□□□□ 0.82
SNRPA-204ENST00000598452 POLR2DO15514 142 aaKnown RBP20.19■□□□□ 0.82
SNRPA-204ENST00000598452 RNF40O75150 1001 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 TNNI1P19237 187 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 SDHBP21912 280 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 CNNM4Q6P4Q7 775 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 SH3RF2Q8TEC5 729 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 OSCP1Q8WVF1 389 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 SNX21Q969T3 373 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 PCED1BQ96HM7 432 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 P2RY13Q9BPV8 354 aa20.19■□□□□ 0.82
SNRPA-204ENST00000598452 IFNAR2P48551 515 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 SNRPFP62306 86 aaKnown RBP20.18■□□□□ 0.82
SNRPA-204ENST00000598452 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 EHHADHQ08426 723 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 USP4Q13107 963 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 MDH1BQ5I0G3 518 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 UNC13DQ70J99 1090 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 CPA6Q8N4T0 437 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 FSIP1Q8NA03 581 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 MYCBPAPQ8TBZ2 947 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 ZNF516Q92618 1163 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 EZH1Q92800 747 aaPredicted RBP20.18■□□□□ 0.82
SNRPA-204ENST00000598452 FNBP1Q96RU3 617 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 CGRRF1Q99675 332 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 GZF1Q9H116 711 aaPredicted RBP20.18■□□□□ 0.82
SNRPA-204ENST00000598452 LINC00597Q9H2U6 94 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 SLC8A2Q9UPR5 921 aa20.18■□□□□ 0.82
SNRPA-204ENST00000598452 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.17■□□□□ 0.82
SNRPA-204ENST00000598452 HSP90AA1P07900 732 aaKnown RBP20.17■□□□□ 0.82
SNRPA-204ENST00000598452 HDCP19113 662 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 GNL1P36915 607 aaPredicted RBP20.17■□□□□ 0.82
SNRPA-204ENST00000598452 ZXDBP98169 803 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 AMPD2Q01433 879 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 KCNB1Q14721 858 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 PSMD6Q15008 389 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 EML3Q32P44 896 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 ATL3Q6DD88 541 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 VSTM1Q6UX27 236 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 DENND5BQ6ZUT9 1274 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 XXYLT1Q8NBI6 393 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 OR6B3Q8NGW1 331 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 EXOC4Q96A65 974 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 SPATA17Q96L03 361 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 RTKNQ9BST9 563 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 SNX25Q9H3E2 840 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 DPEP3Q9H4B8 488 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 SLC39A2Q9NP94 309 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms