RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 GTSE1Q9NYZ3 720 aa16.09■□□□□ 0.17
LIG1-215ENST00000597901 FRMD4BQ9Y2L6 1034 aa16.09■□□□□ 0.17
LIG1-215ENST00000597901 R4GN57 208 aa16.09■□□□□ 0.17
LIG1-215ENST00000597901 CACNA1HO95180 2353 aa16.08■□□□□ 0.17
LIG1-215ENST00000597901 MAPK13O15264 365 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 SOX9P48436 509 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 CSTF1Q05048 431 aaKnown RBP16.08■□□□□ 0.16
LIG1-215ENST00000597901 NFIL3Q16649 462 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 ZACNQ401N2 412 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 ZNF667Q5HYK9 610 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 C1orf220Q5T0J3 134 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 SV2AQ7L0J3 742 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 FMR1NBQ8N0W7 255 aaPredicted RBP16.08■□□□□ 0.16
LIG1-215ENST00000597901 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.16
LIG1-215ENST00000597901 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 CEP295NLQ96MC4 621 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 FAM83CQ9BQN1 747 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 SEMA4AQ9H3S1 761 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 DPEP3Q9H4B8 488 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 FBXO4Q9UKT5 387 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 CCL26Q9Y258 94 aa16.08■□□□□ 0.16
LIG1-215ENST00000597901 GOLGA6L4A6NEF3 574 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 TADA3O75528 432 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 CHRNB1P11230 501 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 RPL13P26373 211 aaKnown RBP16.07■□□□□ 0.16
LIG1-215ENST00000597901 VAMP7P51809 220 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 TNK2Q07912 1038 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 MTAPQ13126 283 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 ADAM9Q13443 819 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 ZNF699Q32M78 642 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 ZNF528Q3MIS6 628 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 RALGPS2Q86X27 583 aaPredicted RBP16.07■□□□□ 0.16
LIG1-215ENST00000597901 MSANTD3Q96H12 275 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 C8orf48Q96LL4 319 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 SMYD3Q9H7B4 428 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 TSC2P49815 1807 aa16.07■□□□□ 0.16
LIG1-215ENST00000597901 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 TRIM66O15016 1216 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 AKAP3O75969 853 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 HDCP19113 662 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 NR2F2P24468 414 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 ANXA13P27216 316 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 PSMC2P35998 433 aaKnown RBP16.06■□□□□ 0.16
LIG1-215ENST00000597901 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 USP46P62068 366 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 PNOCQ13519 176 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 ZNF268Q14587 947 aaPredicted RBP16.06■□□□□ 0.16
LIG1-215ENST00000597901 ITPRIPL2Q3MIP1 535 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 DENND5BQ6ZUT9 1274 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 B3GALNT2Q8NCR0 500 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 TAF4BQ92750 862 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 SLC22A12Q96S37 553 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 SDCBP2Q9H190 292 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 CHRDQ9H2X0 955 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
LIG1-215ENST00000597901 TRAV19A0A0A6YYK7 116 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 F8VP50 259 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 CLDN5O00501 218 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 CLSTN1O94985 981 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 USP17L7P0C7H9 530 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 P4HA1P13674 534 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 CTHP32929 405 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 CACNA2D1P54289 1103 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 RUNX3Q13761 415 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 CC2D1AQ6P1N0 951 aaPredicted RBP16.05■□□□□ 0.16
LIG1-215ENST00000597901 TXNDC11Q6PKC3 985 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 INTS8Q75QN2 995 aaKnown RBP16.05■□□□□ 0.16
LIG1-215ENST00000597901 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
LIG1-215ENST00000597901 ADSSL1Q8N142 457 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 ARL14EPQ8N8R7 260 aaPredicted RBP16.05■□□□□ 0.16
LIG1-215ENST00000597901 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 ZNF518BQ9C0D4 1074 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 KIF9Q9HAQ2 790 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
LIG1-215ENST00000597901 ZFHX2Q9C0A1 2572 aaPredicted RBP16.04■□□□□ 0.16
LIG1-215ENST00000597901 C2orf78A6NCI8 922 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
LIG1-215ENST00000597901 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
LIG1-215ENST00000597901 KRT13P13646 458 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 GCLMP48507 274 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 MCCD1P59942 119 aaPredicted RBP16.04■□□□□ 0.16
LIG1-215ENST00000597901 NOP14P78316 857 aaKnown RBP16.04■□□□□ 0.16
LIG1-215ENST00000597901 FAM160A1Q05DH4 1040 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 ENPEPQ07075 957 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 ZCWPW2Q504Y3 356 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 TRIM68Q6AZZ1 485 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 SPOPLQ6IQ16 392 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 TSSK4Q6SA08 328 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 PAQR9Q6ZVX9 377 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 FAM186BQ8IYM0 893 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms