RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 FOXD4L5Q5VV16 416 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CC2D1AQ6P1N0 951 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 KBTBD6Q86V97 674 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 CCDC65Q8IXS2 484 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 SYNPOQ8N3V7 929 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 ARL14EPQ8N8R7 260 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 FOXD4L4Q8WXT5 416 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 DHX58Q96C10 678 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 MYRFLQ96LU7 910 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 SMOC1Q9H4F8 434 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 TMEM206Q9H813 350 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 ECT2Q9H8V3 914 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 GCNT4Q9P109 453 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 UXTQ9UBK9 157 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 ZMYM5Q9UJ78 669 aa12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 MORC2Q9Y6X9 1032 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-228ENST00000597828 TRAV19A0A0A6YYK7 116 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 SCAMP3O14828 347 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 AXIN1O15169 862 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 STX6O43752 255 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 LRP3O75074 770 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 SDHBP21912 280 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 BDNFP23560 247 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 PCSK1P29120 753 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 LHX1P48742 406 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 GALK1P51570 392 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 ASIC1P78348 528 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 ZXDBP98169 803 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 GRSF1Q12849 480 aaKnown RBP eCLIP12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 SF3A2Q15428 464 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 EML3Q32P44 896 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 FAM171BQ6P995 826 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 LIMS2Q7Z4I7 341 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 RPLP0P6Q8NHW5 317 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 NETO1Q8TDF5 533 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 GAB3Q8WWW8 586 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 MRPL45Q9BRJ2 306 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 TMEM30AQ9NV96 361 aa12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 DUS2Q9NX74 493 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-228ENST00000597828 ASCC3Q8N3C0 2202 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 ZNF233A6NK53 670 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 SLC30A4O14863 429 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CLIC2O15247 247 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 TGFB1I1O43294 461 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 TNNC2P02585 160 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 USP17L7P0C7H9 530 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CCDC192P0DO97 292 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 HOXA6P31267 233 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 IFNAR2P48551 515 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CYP2J2P51589 502 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CACNA2D1P54289 1103 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CYP27A1Q02318 531 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 MYO1EQ12965 1108 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 PSMD2Q13200 908 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 PDGFRLQ15198 375 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 FOXD4L6Q3SYB3 417 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 MDH1BQ5I0G3 518 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 SHC4Q6S5L8 630 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 FOXD4L3Q6VB84 417 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 EPM2AIP1Q7L775 607 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 SPATA18Q8TC71 538 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 OSCP1Q8WVF1 389 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 ELMO3Q96BJ8 720 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 PCED1BQ96HM7 432 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 FUBP3Q96I24 572 aaKnown RBP eCLIP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 MAGEC2Q9UBF1 373 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 CDH9Q9ULB4 789 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 SLC8A2Q9UPR5 921 aa12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-228ENST00000597828 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 K7ELQ4 463 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 SPTLC2O15270 562 aa12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 EPN2O95208 641 aa12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 DLATP10515 647 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 WARSP23381 471 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 GRIK1P39086 918 aa12.93□□□□□ -0.34
SOX2-OT-228ENST00000597828 MAGEA11P43364 429 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms