RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.23
XRCC1-206ENST00000597811 ZFP14Q9HCL3 533 aa16.46■□□□□ 0.23
XRCC1-206ENST00000597811 ZNF334Q9HCZ1 680 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-206ENST00000597811 TMLHEQ9NVH6 421 aa16.46■□□□□ 0.23
XRCC1-206ENST00000597811 RAB20Q9NX57 234 aa16.46■□□□□ 0.23
XRCC1-206ENST00000597811 DLGAP2Q9P1A6 1054 aa16.46■□□□□ 0.23
XRCC1-206ENST00000597811 MAGEC2Q9UBF1 373 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-206ENST00000597811 GREB1Q4ZG55 1949 aa16.46■□□□□ 0.23
XRCC1-206ENST00000597811 MYBPHLA2RUH7 354 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 LRRN2O75325 713 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 ASS1P00966 412 aaKnown RBP16.45■□□□□ 0.22
XRCC1-206ENST00000597811 GLULP15104 373 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 ATF6P18850 670 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 CETN1Q12798 172 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 ANGPT1Q15389 498 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 CBWD6Q4V339 395 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 MDH1BQ5I0G3 518 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 CBWD3Q5JTY5 395 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 CBWD5Q5RIA9 395 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 STXBP5Q5T5C0 1151 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 VITQ6UXI7 678 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 DNAJB7Q7Z6W7 309 aaPredicted RBP16.45■□□□□ 0.22
XRCC1-206ENST00000597811 ITIH5Q86UX2 942 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 PJA1Q8NG27 643 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 ZSCAN18Q8TBC5 510 aaPredicted RBP16.45■□□□□ 0.22
XRCC1-206ENST00000597811 SHDQ96IW2 340 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
XRCC1-206ENST00000597811 SIT1Q9Y3P8 196 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 ASB3Q9Y575 518 aa16.45■□□□□ 0.22
XRCC1-206ENST00000597811 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.45■□□□□ 0.22
XRCC1-206ENST00000597811 PTPRZ1P23471 2315 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-206ENST00000597811 KANSL1LA0AUZ9 987 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 FAM163BP0C2L3 166 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 HAPLN1P10915 354 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-206ENST00000597811 PTPN1P18031 435 aaKnown RBP16.44■□□□□ 0.22
XRCC1-206ENST00000597811 CD58P19256 250 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 CYP2F1P24903 491 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 VIPR2P41587 438 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 PRKCQQ04759 706 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 CCDC142Q17RM4 750 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 FOXR2Q6PJQ5 311 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 GAREM2Q75VX8 874 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 LIMS2Q7Z4I7 341 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 SLC35C1Q96A29 364 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 MYLPFQ96A32 169 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 TNIP3Q96KP6 325 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 MED10Q9BTT4 135 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 DNAI2Q9GZS0 605 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 SLITRK6Q9H5Y7 841 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 HEBP1Q9NRV9 189 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 MAGED2Q9UNF1 606 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-206ENST00000597811 ANAPC1Q9H1A4 1944 aa16.44■□□□□ 0.22
XRCC1-206ENST00000597811 CD72P21854 359 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 BDNFP23560 247 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 ANXA13P27216 316 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 GABRR2P28476 465 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 GRIK1P39086 918 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 MTIF2P46199 727 aaKnown RBP16.43■□□□□ 0.22
XRCC1-206ENST00000597811 FMO5P49326 533 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 RPL10AP62906 217 aaKnown RBP16.43■□□□□ 0.22
XRCC1-206ENST00000597811 LRMPQ12912 555 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 ORC1Q13415 861 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 SDHAF4Q5VUM1 108 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 TPRG1Q6ZUI0 275 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 RSPRY1Q96DX4 576 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
XRCC1-206ENST00000597811 GCNAQ96QF7 691 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 TRMT61BQ9BVS5 477 aaKnown RBP16.43■□□□□ 0.22
XRCC1-206ENST00000597811 GPR88Q9GZN0 384 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 SDCBP2Q9H190 292 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 TRPV4Q9HBA0 871 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 CRTAC1Q9NQ79 661 aa16.43■□□□□ 0.22
XRCC1-206ENST00000597811 MTF2Q9Y483 593 aaPredicted RBP16.43■□□□□ 0.22
XRCC1-206ENST00000597811 ZNF292O60281 2723 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 PROB1E7EW31 1015 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 PSMC3P17980 439 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 NBL1P41271 181 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 ASPAP45381 313 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 GPR15P49685 360 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 NDST1P52848 882 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 UBXN2BQ14CS0 331 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 DDR2Q16832 855 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 FAM171BQ6P995 826 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 ACOT1Q86TX2 421 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 B3GALNT2Q8NCR0 500 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 MYCBPAPQ8TBZ2 947 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 DNASE1L2Q92874 299 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 FUBP3Q96I24 572 aaKnown RBP eCLIP16.42■□□□□ 0.22
XRCC1-206ENST00000597811 PKMYT1Q99640 499 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 BRD9Q9H8M2 597 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 CYP3A43Q9HB55 503 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 IL21Q9HBE4 155 aa16.42■□□□□ 0.22
XRCC1-206ENST00000597811 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms