RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PRCCQ92733 491 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 MCEEQ96PE7 176 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 PAIP2Q9BPZ3 127 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 FAM167BQ9BTA0 163 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 HEMGNQ9BXL5 484 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 HMGXB4Q9UGU5 601 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 USP15Q9Y4E8 981 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 MGAMO43451 1857 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 FAM187AA6NFU0 413 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 LSM8O95777 96 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 GBP1P32455 592 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 SKIV2L2P42285 1042 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ZNF157P51786 506 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 MXRA7P84157 204 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 TMEM132DQ14C87 1099 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 DENND1BQ6P3S1 775 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 APBB1IPQ7Z5R6 666 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ACAP3Q96P50 834 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ADPGKQ9BRR6 497 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 HERPUD2Q9BSE4 406 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 PCYOX1Q9UHG3 505 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 AGTP01019 485 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 CALB1P05937 261 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 COILP38432 576 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 PLTPP55058 493 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 YWHAEP62258 255 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 TAF1CQ15572 869 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 CCL14Q16627 93 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 SGO2Q562F6 1265 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ANO7Q6IWH7 933 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 DNAJC24Q6P3W2 148 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 TEKT4Q8WW24 435 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ATG4AQ8WYN0 398 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 EZH1Q92800 747 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 FMO2Q99518 471 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 SELENOSQ9BQE4 189 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ASB7Q9H672 318 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 CDHR5Q9HBB8 845 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 NMRK2Q9NPI5 230 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 KLHL11Q9NVR0 708 aa17.94■□□□□ 0.46
SHKBP1-205ENST00000594973 ANK1P16157 1881 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 SUN1O94901 812 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 SMIM10L2AP0DMW4 78 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 SMIM10L2BP0DMW5 78 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 GNAZP19086 355 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 ALDH3A1P30838 453 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 MAP2K5Q13163 448 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 PPP1R2P3Q6NXS1 205 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 DCUN1D2Q6PH85 259 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 RHOT1Q8IXI2 618 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 CXorf38Q8TB03 319 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 TWNKQ96RR1 684 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 BCO2Q9BYV7 579 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 FSCN2O14926 492 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 TCF4P15884 667 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 RAD23BP54727 409 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 CYP1B1Q16678 543 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 MORN1Q5T089 497 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 ZFYVE27Q5T4F4 411 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 TLK2Q86UE8 772 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 HPDLQ96IR7 371 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 RAB3IPQ96QF0 476 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 OSMRQ99650 979 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 STMN4Q9H169 189 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 CXCL16Q9H2A7 254 aa17.93■□□□□ 0.46
SHKBP1-205ENST00000594973 DOCK3Q8IZD9 2030 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 A6NJR5 290 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 CYP2B6P20813 491 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ATP6V1C1P21283 382 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 EIF4BP23588 611 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 SDCCAG8Q86SQ7 713 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ZNF410Q86VK4 478 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 KLHL23Q8NBE8 558 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 FBXO25Q8TCJ0 367 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 KIF12Q96FN5 646 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 CHST7Q9NS84 486 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 WDR35Q9P2L0 1181 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 TJP2Q9UDY2 1190 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 PCDHGC3Q9UN70 934 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 GNEQ9Y223 722 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ATP8A1Q9Y2Q0 1164 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 KAT6AQ92794 2004 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 TMEM191CA6NGB0 347 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 GOLGA8SH3BPF8 625 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 RALAP11233 206 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 RPL21P46778 160 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ATP13A4Q4VNC1 1196 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 C6orf118Q5T5N4 469 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 CATSPER4Q7RTX7 472 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 FBF1Q8TES7 1133 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 PRMT1Q99873 361 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 FAM118BQ9BPY3 351 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ZNF518BQ9C0D4 1074 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ADAMTS10Q9H324 1103 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 ZDHHC18Q9NUE0 388 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms