RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GPR25O00155 361 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 CST3P01034 146 aaPredicted RBP16.18■□□□□ 0.18
PNKP-204ENST00000594661 ITGA4P13612 1032 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 ACO1P21399 889 aaKnown RBP16.18■□□□□ 0.18
PNKP-204ENST00000594661 DCAF12L1Q5VU92 463 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 KIAA0319LQ8IZA0 1049 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 NLRP7Q8WX94 980 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 SEC14L1Q92503 715 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 CCDC97Q96F63 343 aaPredicted RBP16.18■□□□□ 0.18
PNKP-204ENST00000594661 CPB2Q96IY4 423 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 FAM81BQ96LP2 452 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 PRMT1Q99873 361 aaKnown RBP16.18■□□□□ 0.18
PNKP-204ENST00000594661 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
PNKP-204ENST00000594661 GJD2Q9UKL4 321 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 ALG6Q9Y672 507 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 TLL2Q9Y6L7 1015 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 MGAMO43451 1857 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 ANK1P16157 1881 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 TMEM110-MUSTN1A8MSY1 372 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 ATMINO43313 823 aaPredicted RBP16.18■□□□□ 0.18
PNKP-204ENST00000594661 FGGP02679 453 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 CTGFP29279 349 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 DDX42Q86XP3 938 aaKnown RBP eCLIP16.18■□□□□ 0.18
PNKP-204ENST00000594661 SELENOSQ9BQE4 189 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 ZFYVE28Q9HCC9 887 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 CIDEBQ9UHD4 219 aa16.18■□□□□ 0.18
PNKP-204ENST00000594661 F2P00734 622 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 NUDT17P0C025 328 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 CCDC166P0CW27 439 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 CXCL8P10145 99 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 RGS2P41220 211 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 AP3M2P53677 418 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 TCEAL1Q15170 157 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 C11orf63Q6NUN7 778 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 ZNF333Q96JL9 665 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 CARD9Q9H257 536 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 FAM114A2Q9NRY5 505 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 TTC7AQ9ULT0 858 aaPredicted RBP16.17■□□□□ 0.18
PNKP-204ENST00000594661 TRIM33Q9UPN9 1127 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 ARL2BPQ9Y2Y0 163 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 KAT6AQ92794 2004 aa16.17■□□□□ 0.18
PNKP-204ENST00000594661 SIGLEC16A6NMB1 481 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 ARF4P18085 180 aaPredicted RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 PTDSS1P48651 473 aaKnown RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 CCDC15Q0P6D6 951 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 IRF5Q13568 498 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 MESDQ14696 234 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 DUOXA2Q1HG44 320 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 LONP2Q86WA8 852 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 FITM2Q8N6M3 262 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 UCMAQ8WVF2 138 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 APBA2Q99767 749 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 PHACTR1Q9C0D0 580 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 PDP2Q9P2J9 529 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 UNC5CO95185 931 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 ASS1P00966 412 aaKnown RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 SMIM10L2AP0DMW4 78 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 SMIM10L2BP0DMW5 78 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 MYL6P60660 151 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 DHX9Q08211 1270 aaKnown RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■□□ 19.1
PNKP-204ENST00000594661 ZNF211Q13398 564 aaPredicted RBP16.16■□□□□ 0.18
PNKP-204ENST00000594661 SURF1Q15526 300 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 TMEM130Q8N3G9 435 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 ALG3Q92685 438 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 ZNF653Q96CK0 615 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 HAPLN3Q96S86 360 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 PRKAG3Q9UGI9 489 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 GGT7Q9UJ14 662 aa16.16■□□□□ 0.18
PNKP-204ENST00000594661 B4GALT4O60513 344 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 TSPAN1O60635 241 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 IGHA2P01877 340 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 FAM200BP0CF97 657 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 FGFR4P22455 802 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 SH3BGRP55822 239 aaPredicted RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 TMEM62Q0P6H9 643 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 HIC1Q14526 733 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 WASHC2DQ5SRD0 308 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 TMEM270Q6UE05 265 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 AGGF1Q8N302 714 aaeCLIP16.15■□□□□ 0.18
PNKP-204ENST00000594661 UBL4BQ8N7F7 174 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 NAP1L3Q99457 506 aaPredicted RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 NUP85Q9BW27 656 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 IMPG2Q9BZV3 1241 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 FAM49AQ9H0Q0 323 aaPredicted RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 LRMDAQ9H2I8 198 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 SLITRK6Q9H5Y7 841 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 RPF1Q9H9Y2 349 aaKnown RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 RPL26L1Q9UNX3 145 aaKnown RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 PCDHB4Q9Y5E5 795 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 TMEM221A6NGB7 291 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 MIF4GDA9UHW6 222 aaKnown RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 MTA2O94776 668 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms