RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SLFN11Q7Z7L1 901 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 ERICH1Q86X53 443 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 HDAC7Q8WUI4 952 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 SUSD3Q96L08 255 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 TJP2Q9UDY2 1190 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 COL4A6Q14031 1691 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 PTPRDP23468 1912 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 TMEM189-UBE2V1I3L0A0 370 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 CYP11A1P05108 521 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 PAX3P23760 479 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 RNASE9P60153 205 aaKnown RBP13.96□□□□□ -0.18
VRK3-205ENST00000593919 GPS2Q13227 327 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 PDCLQ13371 301 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 RPS6KA1Q15418 735 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 CYP4A22Q5TCH4 519 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 KIAA0319Q5VV43 1072 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 PLEKHA7Q6IQ23 1121 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 ZNF771Q7L3S4 317 aaPredicted RBP13.96□□□□□ -0.18
VRK3-205ENST00000593919 SYCE1Q8N0S2 351 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 BTBD6Q96KE9 485 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 MRPL9Q9BYD2 267 aaKnown RBP13.96□□□□□ -0.18
VRK3-205ENST00000593919 DNAI2Q9GZS0 605 aa13.96□□□□□ -0.18
VRK3-205ENST00000593919 KCNK3O14649 394 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 PTPN1P18031 435 aaKnown RBP13.95□□□□□ -0.18
VRK3-205ENST00000593919 ADORA2BP29275 332 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 TKTP29401 623 aaKnown RBP13.95□□□□□ -0.18
VRK3-205ENST00000593919 MAMLD1Q13495 774 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 TMCO4Q5TGY1 634 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 C8orf74Q6P047 294 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
VRK3-205ENST00000593919 TMEM199Q8N511 208 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 SLC2A14Q8TDB8 520 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
VRK3-205ENST00000593919 TRIM7Q9C029 511 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 RNF14Q9UBS8 474 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 HESX1Q9UBX0 185 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
VRK3-205ENST00000593919 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 NLRC5Q86WI3 1866 aa13.95□□□□□ -0.18
VRK3-205ENST00000593919 ABHD14A-ACY1A0A1B0GW23 586 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 TULP2O00295 520 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 NRP1O14786 923 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 GJB6O95452 261 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 ERBB2P04626 1255 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 MESDQ14696 234 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 C11orf63Q6NUN7 778 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 PEX26Q7Z412 305 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 NT5DC3Q86UY8 548 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 SPATA18Q8TC71 538 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 RTP3Q9BQQ7 232 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 SYT15Q9BQS2 421 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 SYNCQ9H7C4 482 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 MRPL47Q9HD33 250 aaKnown RBP13.94□□□□□ -0.18
VRK3-205ENST00000593919 PARVAQ9NVD7 372 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 DSEQ9UL01 958 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 SCINQ9Y6U3 715 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 TCRBV5S1A1TA0A578 114 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 ACRP10323 421 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 PCSK1P29120 753 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 CDR1P51861 262 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 BCAT1P54687 386 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 DEFB103AP81534 67 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 PDE4CQ08493 712 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 OVOS1Q6IE37 1185 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 PMF1Q6P1K2 205 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 HS6ST3Q8IZP7 471 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 FUKQ8N0W3 1084 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 LRRC43Q8N309 656 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 ANKRD52Q8NB46 1076 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 C3orf20Q8ND61 904 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 TOP1MTQ969P6 601 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 CDH9Q9ULB4 789 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 STRIP2Q9ULQ0 834 aa13.94□□□□□ -0.18
VRK3-205ENST00000593919 ARHGEF37A1IGU5 675 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 TMEM110-MUSTN1A8MSY1 372 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 CLDN5O00501 218 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 DGKIO75912 1065 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 TYMPP19971 482 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 PBX3P40426 434 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 GABRB2P47870 512 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 SLC11A1P49279 550 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 GYS2P54840 703 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 BCAR1P56945 870 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 BST2Q10589 180 aaKnown RBP13.93□□□□□ -0.18
VRK3-205ENST00000593919 DNAJC24Q6P3W2 148 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 TMCO2Q7Z6W1 182 aaPredicted RBP13.93□□□□□ -0.18
VRK3-205ENST00000593919 XYLT1Q86Y38 959 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 SLC35F5Q8WV83 523 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 HNRNPABQ99729 332 aaKnown RBP13.93□□□□□ -0.18
VRK3-205ENST00000593919 SELENOOQ9BVL4 669 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 PLEKHA4Q9H4M7 779 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 MARCH5Q9NX47 278 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 STIM2Q9P246 746 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 ADAM28Q9UKQ2 775 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms