RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GPR161Q8N6U8 529 aaKnown RBP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 ARL14EPQ8N8R7 260 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 FSIP1Q8NA03 581 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 SPATA18Q8TC71 538 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 SCFD1Q8WVM8 642 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 SNX21Q969T3 373 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 TRMT2BQ96GJ1 504 aaKnown RBP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 FUBP3Q96I24 572 aaKnown RBP eCLIP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 SLC22A12Q96S37 553 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 CGRRF1Q99675 332 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 FAM83CQ9BQN1 747 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 MRPL45Q9BRJ2 306 aaKnown RBP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 MAGEF1Q9HAY2 307 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 CRTAC1Q9NQ79 661 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 DUS2Q9NX74 493 aaKnown RBP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 PCDHA7Q9UN72 937 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 C2orf78A6NCI8 922 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 HRO43593 1189 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 PHACTR2O75167 634 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 ABL1P00519 1130 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 CST3P01034 146 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-243ENST00000593128 IFNAR2P48551 515 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 PXNP49023 591 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-243ENST00000593128 CYP24A1Q07973 514 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 IFRD2Q12894 506 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-243ENST00000593128 TRPC3Q13507 836 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 CUL4BQ13620 913 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 KCNB1Q14721 858 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 FAM171BQ6P995 826 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 LONP2Q86WA8 852 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 CEP57L1Q8IYX8 460 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 NXF1Q9UBU9 619 aaKnown RBP19.17■□□□□ 0.66
CIRBP-243ENST00000593128 CDV3Q9UKY7 258 aaKnown RBP19.17■□□□□ 0.66
CIRBP-243ENST00000593128 WNT6Q9Y6F9 365 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 UBE4BO95155 1302 aa19.17■□□□□ 0.66
CIRBP-243ENST00000593128 ATG2BQ96BY7 2078 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 ANAPC1Q9H1A4 1944 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 MED19A0JLT2 244 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-243ENST00000593128 K7ESF4 209 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 WARSP23381 471 aaKnown RBP19.16■□□□□ 0.66
CIRBP-243ENST00000593128 GNL1P36915 607 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-243ENST00000593128 MAGEA11P43364 429 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 AMPD2Q01433 879 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 FAM160A1Q05DH4 1040 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 PKP1Q13835 747 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 PSMD6Q15008 389 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 PDGFRLQ15198 375 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 MAPRE1Q15691 268 aaKnown RBP19.16■□□□□ 0.66
CIRBP-243ENST00000593128 WDR72Q3MJ13 1102 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 LAIR1Q6GTX8 287 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 FSTL4Q6MZW2 842 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 PKN3Q6P5Z2 889 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 CPA6Q8N4T0 437 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 CHFRQ96EP1 664 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 PCED1BQ96HM7 432 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 MYRFLQ96LU7 910 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 PARD6AQ9NPB6 346 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 SLC8A2Q9UPR5 921 aa19.16■□□□□ 0.66
CIRBP-243ENST00000593128 GREB1Q4ZG55 1949 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 EXOC3O60645 756 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 EGFP01133 1207 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 HDCP19113 662 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 CASP4P49662 377 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 LMNB2Q03252 620 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 DNM1Q05193 864 aaKnown RBP19.15■□□□□ 0.66
CIRBP-243ENST00000593128 PSMD2Q13200 908 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 BIRC3Q13489 604 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 ZNF268Q14587 947 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-243ENST00000593128 TMEM196Q5HYL7 178 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 NAIF1Q69YI7 327 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-243ENST00000593128 CNNM4Q6P4Q7 775 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 SYNPOQ8N3V7 929 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 SH3RF2Q8TEC5 729 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 DPEP3Q9H4B8 488 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 SERTAD1Q9UHV2 236 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
CIRBP-243ENST00000593128 HELZP42694 1942 aaKnown RBP19.15■□□□□ 0.66
CIRBP-243ENST00000593128 PTPRDP23468 1912 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 SOBPA7XYQ1 873 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 RNF40O75150 1001 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 GALK1P51570 392 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 MYL6P60660 151 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 USP46P62068 366 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 ZNF77Q15935 545 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 RESP18Q5W5W9 173 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 VSTM1Q6UX27 236 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 DENND5BQ6ZUT9 1274 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 MYCBPAPQ8TBZ2 947 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 OSCP1Q8WVF1 389 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 ATP2A3Q93084 1043 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 P2RY13Q9BPV8 354 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 ECT2Q9H8V3 914 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 FBRSL1Q9HCM7 1045 aaKnown RBP19.14■□□□□ 0.65
CIRBP-243ENST00000593128 POLR3BQ9NW08 1133 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-243ENST00000593128 TRPM5Q9NZQ8 1165 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.14■□□□□ 0.65
CIRBP-243ENST00000593128 GPR179Q6PRD1 2367 aa19.14■□□□□ 0.65
CIRBP-243ENST00000593128 A8MXQ7 604 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 F8VP50 259 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms