RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ARHGAP29Q52LW3 1261 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 VSTM1Q6UX27 236 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 SMYD4Q8IYR2 804 aaPredicted RBP14.81□□□□□ -0.04
APOC1-208ENST00000592535 ZNF687Q8N1G0 1237 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 CELF5Q8N6W0 485 aaKnown RBP14.81□□□□□ -0.04
APOC1-208ENST00000592535 ENGASEQ8NFI3 743 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 CSGALNACT1Q8TDX6 532 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 FAM3CQ92520 227 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 CLDN23Q96B33 292 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 SDCBP2Q9H190 292 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 SPATA6Q9NWH7 488 aaPredicted RBP14.81□□□□□ -0.04
APOC1-208ENST00000592535 ZMYM5Q9UJ78 669 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 CCL26Q9Y258 94 aa14.81□□□□□ -0.04
APOC1-208ENST00000592535 MYH10P35580 1976 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 MAPK13O15264 365 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 NCAM2O15394 837 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 CCNE1P24864 410 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 AVPR1AP37288 418 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 SOX9P48436 509 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 VAMP7P51809 220 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 ZCWPW2Q504Y3 356 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 SV2AQ7L0J3 742 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 MON1AQ86VX9 555 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 MAML2Q8IZL2 1156 aaPredicted RBP14.8□□□□□ -0.04
APOC1-208ENST00000592535 TTC8Q8TAM2 541 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 USP13Q92995 863 aaPredicted RBP14.8□□□□□ -0.04
APOC1-208ENST00000592535 CCDC34Q96HJ3 373 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 SPATA17Q96L03 361 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 ZNF518BQ9C0D4 1074 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 TRPC7Q9HCX4 862 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 GTSE1Q9NYZ3 720 aa14.8□□□□□ -0.04
APOC1-208ENST00000592535 SOBPA7XYQ1 873 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 F8VP50 259 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 CLDN5O00501 218 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 IKBKBO14920 756 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 SP9P0CG40 484 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 TRIM49P0CI25 452 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 TRIM49CP0CI26 452 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 ANXA13P27216 316 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 MAGEA9P43362 315 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 RPS9P46781 194 aaKnown RBP14.79□□□□□ -0.04
APOC1-208ENST00000592535 KPNA1P52294 538 aaPredicted RBP14.79□□□□□ -0.04
APOC1-208ENST00000592535 CACNA2D1P54289 1103 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 USP46P62068 366 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 FAM160A1Q05DH4 1040 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 TNK2Q07912 1038 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 SPOPLQ6IQ16 392 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 ASCL5Q7RTU5 278 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 FAM186BQ8IYM0 893 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 B3GALNT2Q8NCR0 500 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 RIN3Q8TB24 985 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 ERCC4Q92889 916 aaPredicted RBP14.79□□□□□ -0.04
APOC1-208ENST00000592535 SLC22A12Q96S37 553 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 B3GNT5Q9BYG0 378 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 TDP1Q9NUW8 608 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 TMEM30AQ9NV96 361 aa14.79□□□□□ -0.04
APOC1-208ENST00000592535 PRR23AA6NEV1 266 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 TRIM66O15016 1216 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 LAMTOR5O43504 91 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 ASS1P00966 412 aaKnown RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 HLA-DRAP01903 254 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 RPL13P26373 211 aaKnown RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 PSMC2P35998 433 aaKnown RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 PIK3CAP42336 1068 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 GCLMP48507 274 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 MLLT6P55198 1093 aaPredicted RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 PPP3CAQ08209 521 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 ADAM9Q13443 819 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 SGSM1Q2NKQ1 1148 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 DENND5BQ6ZUT9 1274 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 INTS8Q75QN2 995 aaKnown RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 NKD2Q969F2 451 aaPredicted RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 C8orf48Q96LL4 319 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 CEP295NLQ96MC4 621 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 CYP2S1Q96SQ9 504 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 ELOVL4Q9GZR5 314 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 C8orf33Q9H7E9 229 aaPredicted RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 MMRN2Q9H8L6 949 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 KIF9Q9HAQ2 790 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.78□□□□□ -0.04
APOC1-208ENST00000592535 GKN1Q9NS71 199 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 RMND1Q9NWS8 449 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 THG1LQ9NWX6 298 aaKnown RBP14.78□□□□□ -0.04
APOC1-208ENST00000592535 R4GN57 208 aa14.78□□□□□ -0.04
APOC1-208ENST00000592535 C2orf78A6NCI8 922 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 SPECC1L-ADORA2AF8WAN1 911 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 CKMP06732 381 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 KRT13P13646 458 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 P4HA1P13674 534 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 CTHP32929 405 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 PRCPP42785 496 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 ASPAP45381 313 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 MTAPQ13126 283 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 ZNF268Q14587 947 aaPredicted RBP14.77□□□□□ -0.05
APOC1-208ENST00000592535 EDRF1Q3B7T1 1238 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 ZNF658Q5TYW1 1059 aaPredicted RBP14.77□□□□□ -0.05
APOC1-208ENST00000592535 TRIM68Q6AZZ1 485 aa14.77□□□□□ -0.05
APOC1-208ENST00000592535 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms