RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CLDN23Q96B33 292 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 GSDMAQ96QA5 445 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 PCDHA5Q9Y5H7 936 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 FANCMQ8IYD8 2048 aa21.53■■□□□ 1.04
CIRBP-239ENST00000592467 SOBPA7XYQ1 873 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 ASS1P00966 412 aaKnown RBP21.52■■□□□ 1.04
CIRBP-239ENST00000592467 TRIM49P0CI25 452 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 TRIM49CP0CI26 452 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 DDX6P26196 483 aaKnown RBP eCLIP21.52■■□□□ 1.04
CIRBP-239ENST00000592467 NBL1P41271 181 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 USP46P62068 366 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 CYP27A1Q02318 531 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 ADAM9Q13443 819 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 UBXN2BQ14CS0 331 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 ZNF667Q5HYK9 610 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 ZNF658Q5TYW1 1059 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-239ENST00000592467 MON1AQ86VX9 555 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 ZC3H3Q8IXZ2 948 aaKnown RBP21.52■■□□□ 1.04
CIRBP-239ENST00000592467 MAB21L3Q8N8X9 362 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 B3GALNT2Q8NCR0 500 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 USP13Q92995 863 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-239ENST00000592467 CEP295NLQ96MC4 621 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 GCNAQ96QF7 691 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 B3GNT5Q9BYG0 378 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 ZMYM5Q9UJ78 669 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 CCL26Q9Y258 94 aa21.52■■□□□ 1.04
CIRBP-239ENST00000592467 HELZP42694 1942 aaKnown RBP21.52■■□□□ 1.04
CIRBP-239ENST00000592467 GOLGA6L4A6NEF3 574 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 A8MXQ7 604 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 HLA-DRAP01903 254 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 MLLT6P55198 1093 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-239ENST00000592467 SGSM1Q2NKQ1 1148 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 SPOPLQ6IQ16 392 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 ZNF852Q6ZMS4 543 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 PAQR9Q6ZVX9 377 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 INTS8Q75QN2 995 aaKnown RBP21.51■■□□□ 1.03
CIRBP-239ENST00000592467 ELOA2Q8IYF1 753 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-239ENST00000592467 FAM186BQ8IYM0 893 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 BPIFB1Q8TDL5 484 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 ZFYVE19Q96K21 471 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 C8orf48Q96LL4 319 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 SLC22A12Q96S37 553 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 TTLL2Q9BWV7 592 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 ZNF518BQ9C0D4 1074 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 UXTQ9UBK9 157 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-239ENST00000592467 PIAS3Q9Y6X2 628 aa21.51■■□□□ 1.03
CIRBP-239ENST00000592467 CLDN5O00501 218 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 GADD45BO75293 160 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-239ENST00000592467 RPL13P26373 211 aaKnown RBP21.5■■□□□ 1.03
CIRBP-239ENST00000592467 PSMC2P35998 433 aaKnown RBP21.5■■□□□ 1.03
CIRBP-239ENST00000592467 ASPAP45381 313 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 PMS1P54277 932 aaKnown RBP21.5■■□□□ 1.03
CIRBP-239ENST00000592467 WDR44Q5JSH3 913 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 SCARA5Q6ZMJ2 495 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 CELF5Q8N6W0 485 aaKnown RBP21.5■■□□□ 1.03
CIRBP-239ENST00000592467 TAF4BQ92750 862 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 EEF2KMTQ96G04 330 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 CCDC34Q96HJ3 373 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 NELL2Q99435 816 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 APOBEC3GQ9HC16 384 aaKnown RBP21.5■■□□□ 1.03
CIRBP-239ENST00000592467 RMND1Q9NWS8 449 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 GCNT4Q9P109 453 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 HMGXB4Q9UGU5 601 aa21.5■■□□□ 1.03
CIRBP-239ENST00000592467 F8VP50 259 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 GRIK1P39086 918 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 RPS9P46781 194 aaKnown RBP21.49■■□□□ 1.03
CIRBP-239ENST00000592467 GCLMP48507 274 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 ARHGAP29Q52LW3 1261 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 C1orf210Q8IVY1 113 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 YAF2Q8IY57 180 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 ADSSL1Q8N142 457 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 TAS1R2Q8TE23 839 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 MRPS31Q92665 395 aaKnown RBP21.49■■□□□ 1.03
CIRBP-239ENST00000592467 BCO2Q9BYV7 579 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 TDP1Q9NUW8 608 aa21.49■■□□□ 1.03
CIRBP-239ENST00000592467 CIZ1Q9ULV3 898 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-239ENST00000592467 MAN2B1O00754 1011 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 DPYSL4O14531 572 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 TRIM66O15016 1216 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 SOX9P48436 509 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 NOP14P78316 857 aaKnown RBP21.48■■□□□ 1.03
CIRBP-239ENST00000592467 ZNF268Q14587 947 aaPredicted RBP21.48■■□□□ 1.03
CIRBP-239ENST00000592467 ANKRD40Q6AI12 368 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 DENND5BQ6ZUT9 1274 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 FAM3CQ92520 227 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 CYP2S1Q96SQ9 504 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 FAM83CQ9BQN1 747 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 ELOVL4Q9GZR5 314 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 GTSE1Q9NYZ3 720 aa21.48■■□□□ 1.03
CIRBP-239ENST00000592467 C2orf78A6NCI8 922 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 BMP6P22004 513 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 AVPR1AP37288 418 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 PIK3CAP42336 1068 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 MAGEA9P43362 315 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 TNK2Q07912 1038 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 TXNDC11Q6PKC3 985 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 FRMD5Q7Z6J6 570 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 CRYBG2Q8N1P7 616 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 SMARCE1Q969G3 411 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 CHFRQ96EP1 664 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms