RNA–Protein interactions for RNA: ENST00000591989.5

NEDD4L-233, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 3

Gene NEDD4L, Length 233 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-233	ENST00000591989	NR2F2	P24468	414 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	TARS	P26639	723 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	ANXA13	P27216	316 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	RAP1GAP	P47736	663 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	KPNA1	P52294	538 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	CDH8	P55286	799 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	NCOA4	Q13772	614 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	KCNB1	Q14721	858 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MAPRE1	Q15691	268 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	ZNF699	Q32M78	642 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	CFAP221	Q4G0U5	840 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	TXNDC8	Q6A555	127 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	ZC3H14	Q6PJT7	736 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	SCARA5	Q6ZMJ2	495 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	LIMS2	Q7Z4I7	341 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	CMTM8	Q8IZV2	173 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	TTC16	Q8NEE8	873 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MYCBPAP	Q8TBZ2	947 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MRPS31	Q92665	395 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	PCED1B	Q96HM7	432 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	1e-7	■■■□□ 17
NEDD4L-233	ENST00000591989	ZFYVE19	Q96K21	471 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	NELL2	Q99435	816 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	DPEP3	Q9H4B8	488 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MMRN2	Q9H8L6	949 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	UXT	Q9UBK9	157 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	TRAF3IP3	Q9Y228	551 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MRPS17	Q9Y2R5	130 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	NME7	Q9Y5B8	376 aa		13.21	□□□□□ -0.29
NEDD4L-233	ENST00000591989	MYH10	P35580	1976 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	PTPRD	P23468	1912 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	MAN2B1	O00754	1011 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	CHAD	O15335	359 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	STAU1	O95793	577 aa	Known RBP	13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	KRT13	P13646	458 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	PTPN1	P18031	435 aa	Known RBP	13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	RPL13	P26373	211 aa	Known RBP	13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	AVPR1A	P37288	418 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	VAMP7	P51809	220 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ADAM9	Q13443	819 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	SGSM1	Q2NKQ1	1148 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TMEM150A	Q86TG1	271 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	C1orf210	Q8IVY1	113 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	GUF1	Q8N442	669 aa	Known RBP	13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	CELF5	Q8N6W0	485 aa	Known RBP	13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TMC2	Q8TDI7	906 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	BPIFB1	Q8TDL5	484 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FAM3C	Q92520	227 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	LRRC3B	Q96PB8	259 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	XYLT2	Q9H1B5	865 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	SMYD3	Q9H7B4	428 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TRPC7	Q9HCX4	862 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	PIAS3	Q9Y6X2	628 aa		13.2	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ANAPC1	Q9H1A4	1944 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	NOL4	O94818	638 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	VNN1	O95497	513 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	PRAMEF12	O95522	483 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FAM163B	P0C2L3	166 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	CCNE1	P24864	410 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	DDX6	P26196	483 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	PSMC2	P35998	433 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	PIK3CA	P42336	1068 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	MAGEA11	P43364	429 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	SOX9	P48436	509 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	CLDN10	P78369	228 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FCHO2	Q0JRZ9	810 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ARHGAP29	Q52LW3	1261 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	VSTM1	Q6UX27	236 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	SV2A	Q7L0J3	742 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FAM186B	Q8IYM0	893 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TMEM174	Q8WUU8	243 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ERCC4	Q92889	916 aa	Predicted RBP	13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	MED10	Q9BTT4	135 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	OSBPL6	Q9BZF3	934 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TRPV5	Q9NQA5	729 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	RMND1	Q9NWS8	449 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	THG1L	Q9NWX6	298 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	GTSE1	Q9NYZ3	720 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ZMYM5	Q9UJ78	669 aa		13.19	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FRY	Q5TBA9	3013 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	CLDN5	O00501	218 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	IKBKB	O14920	756 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TRIM66	O15016	1216 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	LAMTOR5	O43504	91 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	AKAP3	O75969	853 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	HLA-DRA	P01903	254 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TRIM49	P0CI25	452 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	TRIM49C	P0CI26	452 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	P4HA1	P13674	534 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	GCLM	P48507	274 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ATXN1	P54253	815 aa	Known RBP	13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	FAM160A1	Q05DH4	1040 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	IFRD2	Q12894	506 aa	Predicted RBP	13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ZACN	Q401N2	412 aa		13.18	□□□□□ -0.3
NEDD4L-233	ENST00000591989	ISM2	Q6H9L7	571 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms