RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 COL4A2P08572 1712 aa29.02■■■□□ 2.24
SMAD4-213ENST00000591914 COL4A3Q01955 1670 aa29.02■■■□□ 2.24
SMAD4-213ENST00000591914 SOBPA7XYQ1 873 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 GALR2O43603 387 aaPredicted RBP29.01■■■□□ 2.23
SMAD4-213ENST00000591914 TADA3O75528 432 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 PRAMEF12O95522 483 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 CCNE1P24864 410 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 DDX6P26196 483 aaKnown RBP eCLIP29.01■■■□□ 2.23
SMAD4-213ENST00000591914 GRIK1P39086 918 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 PTPN5P54829 565 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 FCHO2Q0JRZ9 810 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 MORC3Q14149 939 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 KRT39Q6A163 491 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 IRF7Q92985 503 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 TNIP3Q96KP6 325 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 B3GNT5Q9BYG0 378 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 BCO2Q9BYV7 579 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 IMPG2Q9BZV3 1241 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 ELOVL4Q9GZR5 314 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 MMRN2Q9H8L6 949 aa29.01■■■□□ 2.23
SMAD4-213ENST00000591914 TRIM66O15016 1216 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 STX10O60499 249 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 GDI1P31150 447 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 NOP14P78316 857 aaKnown RBP29■■■□□ 2.23
SMAD4-213ENST00000591914 GPIHBP1Q8IV16 184 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 CMTM8Q8IZV2 173 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 C8orf48Q96LL4 319 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 LRRC3BQ96PB8 259 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 ZNF518BQ9C0D4 1074 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 APOBEC3GQ9HC16 384 aaKnown RBP29■■■□□ 2.23
SMAD4-213ENST00000591914 TMEM30AQ9NV96 361 aa29■■■□□ 2.23
SMAD4-213ENST00000591914 ARNTLO00327 626 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 CACNA2D1P54289 1103 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 NHLH1Q02575 133 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 MON1AQ86VX9 555 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 PJA1Q8NG27 643 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 MRPS31Q92665 395 aaKnown RBP28.99■■■□□ 2.23
SMAD4-213ENST00000591914 HEBP1Q9NRV9 189 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 SIT1Q9Y3P8 196 aa28.99■■■□□ 2.23
SMAD4-213ENST00000591914 KANSL1LA0AUZ9 987 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 PPP1R3GB7ZBB8 358 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 F8VP50 259 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 CLDN5O00501 218 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 ZNF263O14978 683 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 ANXA13P27216 316 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 MXI1P50539 228 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 TXNDC8Q6A555 127 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 FOXR2Q6PJQ5 311 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 UNC93AQ86WB7 457 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 CCDC105Q8IYK2 499 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 MAB21L3Q8N8X9 362 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 FOXQ1Q9C009 403 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 NIF3L1Q9GZT8 377 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.98■■■□□ 2.233e-9■■■■■ 48.4
SMAD4-213ENST00000591914 HMGXB4Q9UGU5 601 aa28.98■■■□□ 2.23
SMAD4-213ENST00000591914 BIN1O00499 593 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 DPYSL4O14531 572 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 CHADO15335 359 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 LRRN2O75325 713 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 NDST1P52848 882 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 INCA1Q0VD86 236 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 TPRG1Q6ZUI0 275 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 DENND5BQ6ZUT9 1274 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 ACOT1Q86TX2 421 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 YAF2Q8IY57 180 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 CRYBG2Q8N1P7 616 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 SEMA4DQ92854 862 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 TTLL2Q9BWV7 592 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 SMG9Q9H0W8 520 aaKnown RBP28.97■■■□□ 2.23
SMAD4-213ENST00000591914 CYP3A43Q9HB55 503 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 DLGAP2Q9P1A6 1054 aa28.97■■■□□ 2.23
SMAD4-213ENST00000591914 TICRRQ7Z2Z1 1910 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 SHISA7A6NL88 538 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 AVPR1AP37288 418 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 USP46P62068 366 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 TTI2Q6NXR4 508 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 PAQR9Q6ZVX9 377 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 FAM35AQ86V20 835 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 CELF5Q8N6W0 485 aaKnown RBP28.96■■■□□ 2.23
SMAD4-213ENST00000591914 DTWD2Q8NBA8 298 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 CCDC150Q8NCX0 1101 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 FBXL13Q8NEE6 735 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 CEP63Q96MT8 703 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 DUSP9Q99956 384 aaKnown RBP28.96■■■□□ 2.23
SMAD4-213ENST00000591914 EHD2Q9NZN4 543 aa28.96■■■□□ 2.23
SMAD4-213ENST00000591914 ARMCX3Q9UH62 379 aaPredicted RBP28.96■■■□□ 2.23
SMAD4-213ENST00000591914 ATP8B3O60423 1300 aa28.95■■■□□ 2.23
SMAD4-213ENST00000591914 CACNA1HO95180 2353 aa28.95■■■□□ 2.23
SMAD4-213ENST00000591914 DCAF17Q5H9S7 520 aaPredicted RBP28.95■■■□□ 2.22
SMAD4-213ENST00000591914 TCERG1LQ5VWI1 586 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 KLHL10Q6JEL2 608 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 FUKQ8N0W3 1084 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 BPIFB1Q8TDL5 484 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 USP13Q92995 863 aaPredicted RBP28.95■■■□□ 2.22
SMAD4-213ENST00000591914 FAXDC2Q96IV6 333 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 OSBPL6Q9BZF3 934 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 RAB20Q9NX57 234 aa28.95■■■□□ 2.22
SMAD4-213ENST00000591914 ANAPC1Q9H1A4 1944 aa28.94■■■□□ 2.22
SMAD4-213ENST00000591914 KIF26AQ9ULI4 1882 aaPredicted RBP28.94■■■□□ 2.22
SMAD4-213ENST00000591914 DCNP07585 359 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms