RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 SOCS4Q8WXH5 440 aa4.48□□□□□ -1.69
TPM4-214ENST00000591645 SMG7Q92540 1137 aaKnown RBP4.48□□□□□ -1.69
TPM4-214ENST00000591645 CPA4Q9UI42 421 aa4.48□□□□□ -1.69
TPM4-214ENST00000591645 A1L4Q6 167 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 TUSC2O75896 110 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 FESP07332 822 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 U2AF1L5P0DN76 240 aaPredicted RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 CERS1P27544 350 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 U2AF1Q01081 240 aaKnown RBP eCLIP4.47□□□□□ -1.69
TPM4-214ENST00000591645 MYO1EQ12965 1108 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 GRM1Q13255 1194 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 LMBRD2Q68DH5 695 aaPredicted RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 CXorf57Q6NSI4 855 aaKnown RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 ZNF783Q6ZMS7 281 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 PARS2Q7L3T8 475 aaKnown RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 TPH2Q8IWU9 490 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 SLC15A3Q8IY34 581 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 DNAJC5GQ8N7S2 189 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 FANCBQ8NB91 859 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 GLG1Q92896 1179 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 RUNDC1Q96C34 613 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 P2RX7Q99572 595 aaKnown RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 ACO2Q99798 780 aaKnown RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 THAP7Q9BT49 309 aaPredicted RBP4.47□□□□□ -1.69
TPM4-214ENST00000591645 CXorf36Q9H7Y0 433 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 STAP2Q9UGK3 403 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 ADAMTS5Q9UNA0 930 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 CUX2O14529 1486 aa4.47□□□□□ -1.69
TPM4-214ENST00000591645 ZNF804BA4D1E1 1349 aa4.46□□□□□ -1.69
TPM4-214ENST00000591645 A0A1W2PPL8 197 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 TISP43B9A030 160 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 H7C1Q1 480 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 MYO1CO00159 1063 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 PHGDHO43175 533 aaKnown RBP4.46□□□□□ -1.7
TPM4-214ENST00000591645 DLDP09622 509 aaKnown RBP4.46□□□□□ -1.7
TPM4-214ENST00000591645 NPSP0C0P6 89 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 EN2P19622 333 aaPredicted RBP4.46□□□□□ -1.7
TPM4-214ENST00000591645 KCNA3P22001 575 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 DGKEP52429 567 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 TPTEP56180 551 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 TUBA4AP68366 448 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 MGAT5BQ3V5L5 792 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 PCID2Q5JVF3 399 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 Q6ZWC4 215 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 LRRC71Q8N4P6 559 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 ZBTB34Q8NCN2 500 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 OR6B3Q8NGW1 331 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 PPP1R35Q8TAP8 253 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 DDB2Q92466 427 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 RSPRY1Q96DX4 576 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 TMEM60Q9H2L4 133 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 ANLNQ9NQW6 1124 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 ZIM2Q9NZV7 527 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 SH3BP4Q9P0V3 963 aa4.46□□□□□ -1.7
TPM4-214ENST00000591645 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 BTN3A1O00481 513 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 FRS3O43559 492 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 PRKCBP05771 671 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 ZNF81P51508 661 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 CYP4F2P78329 520 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 HOXA4Q00056 320 aaPredicted RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
TPM4-214ENST00000591645 ZIK1Q3SY52 487 aaPredicted RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 ZNF66Q6ZN08 573 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 OVCH2Q7RTZ1 564 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 NEK8Q86SG6 692 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 ZNF280BQ86YH2 543 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 OSCP1Q8WVF1 389 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 R3HDM4Q96D70 268 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 ZMAT3Q9HA38 289 aaKnown RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 ATP6V0A4Q9HBG4 840 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 TRMT13Q9NUP7 481 aaKnown RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 RNF7Q9UBF6 113 aa4.45□□□□□ -1.7
TPM4-214ENST00000591645 RGS17Q9UGC6 210 aaPredicted RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 MRPS17Q9Y2R5 130 aaKnown RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 THRAP3Q9Y2W1 955 aaKnown RBP4.45□□□□□ -1.7
TPM4-214ENST00000591645 FAM227AF5H4B4 570 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 NHLRC4P0CG21 123 aaPredicted RBP4.44□□□□□ -1.7
TPM4-214ENST00000591645 ENGP17813 658 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 CTGFP29279 349 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 EPHB2P29323 1055 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 PDE1AP54750 535 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 CTBP1Q13363 440 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 RAB32Q13637 225 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 TBC1D25Q3MII6 688 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 TMEM119Q4V9L6 283 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 ODR4Q5SWX8 454 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 PRAMEF17Q5VTA0 474 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 NXNQ6DKJ4 435 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 ZNF425Q6IV72 752 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 NPNTQ6UXI9 565 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 TRIM72Q6ZMU5 477 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 MAEAQ7L5Y9 396 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 KIAA0319LQ8IZA0 1049 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 ABRAQ8N0Z2 381 aa4.44□□□□□ -1.7
TPM4-214ENST00000591645 SLC15A4Q8N697 577 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms