RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NFE2Q16621 373 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 SV2CQ496J9 727 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ARSHQ5FYA8 562 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 IL31Q6EBC2 164 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 FAM173BQ6P4H8 233 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 PRR23CQ6ZRP0 262 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 GAREM2Q75VX8 874 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 WDR5BQ86VZ2 330 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 C12orf50Q8NA57 414 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 LRRC15Q8TF66 581 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 HVCN1Q96D96 273 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 LOXL4Q96JB6 756 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ZNF560Q96MR9 790 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ZNF396Q96N95 335 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 TMEM209Q96SK2 561 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 SCAND2PQ9GZW5 306 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ZCWPW1Q9H0M4 648 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 KIF9Q9HAQ2 790 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ETNK1Q9HBU6 452 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 DPP3Q9NY33 737 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 UXTQ9UBK9 157 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 AGO2Q9UKV8 859 aaKnown RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 SLC8A2Q9UPR5 921 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 EXOC7Q9UPT5 735 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 R3HCC1Q9Y3T6 440 aaKnown RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 WASF2Q9Y6W5 498 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 DCDC2BA2VCK2 349 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 FAM189A1O60320 539 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 VNN2O95498 520 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CSH1P0DML2 217 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CSH2P0DML3 217 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 SYT1P21579 422 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 TXLNAP40222 546 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CCINQ13939 588 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 PON2Q15165 354 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 FBXO43Q4G163 708 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 HEATR6Q6AI08 1181 aaKnown RBP10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CAPN12Q6ZSI9 719 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CACNA2D4Q7Z3S7 1137 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CMTM8Q8IZV2 173 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CACTINQ8WUQ7 758 aaKnown RBP10.15□□□□□ -0.78
BRCA1-226ENST00000591534 POMGNT1Q8WZA1 660 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 MRPS31Q92665 395 aaKnown RBP10.15□□□□□ -0.78
BRCA1-226ENST00000591534 RAD54LQ92698 747 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 PYM1Q9BRP8 204 aaKnown RBP10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 HAPLN2Q9GZV7 340 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CRISPLD1Q9H336 500 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 ST6GALNAC4Q9H4F1 302 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 PARD6AQ9NPB6 346 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 RBM12Q9NTZ6 932 aaKnown RBP10.15□□□□□ -0.78
BRCA1-226ENST00000591534 GTSE1Q9NYZ3 720 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 SEL1LQ9UBV2 794 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 CCDC39Q9UFE4 941 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 PCDHB5Q9Y5E4 795 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 TRIP11Q15643 1979 aa10.15□□□□□ -0.78
BRCA1-226ENST00000591534 GPR179Q6PRD1 2367 aa10.15□□□□□ -0.79
BRCA1-226ENST00000591534 FANCMQ8IYD8 2048 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 VPS37CA5D8V6 355 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 KPNA7A9QM74 516 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 K7ESF4 209 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 NRG2O14511 850 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 AKAP3O75969 853 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 LDHAP00338 332 aaKnown RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 ADRB1P08588 477 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 NFICP08651 508 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 CCDC192P0DO97 292 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 HAPLN1P10915 354 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 DRD1P21728 446 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 SOX9P48436 509 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 ACOT2P49753 483 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 RPL10AP62906 217 aaKnown RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 KRT85P78386 507 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 RUNX3Q13761 415 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 GAS6Q14393 721 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 PDGFRLQ15198 375 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 AASDHQ4L235 1098 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 PPM1JQ5JR12 505 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 STXBP5Q5T5C0 1151 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 TMEM86AQ8N2M4 240 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 CAMKK1Q8N5S9 505 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 FSIP1Q8NA03 581 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 OR10T2Q8NGX3 314 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 SNIP1Q8TAD8 396 aaKnown RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 TTC8Q8TAM2 541 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 LARP4BQ92615 738 aaKnown RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 RSPRY1Q96DX4 576 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 CHAMP1Q96JM3 812 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 ZFYVE19Q96K21 471 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 CNTNAP3BQ96NU0 1288 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 LPIN3Q9BQK8 851 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 SLC46A2Q9BY10 475 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 CNTNAP3Q9BZ76 1288 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 GKN1Q9NS71 199 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 TDP1Q9NUW8 608 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 ABI2Q9NYB9 513 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms