RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 FUBP3Q96I24 572 aaKnown RBP eCLIP12.26□□□□□ -0.45
VMP1-211ENST00000591315 LRRC3BQ96PB8 259 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 KCNK16Q96T55 309 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 CRACR2AQ9BSW2 395 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 MED10Q9BTT4 135 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 SMG9Q9H0W8 520 aaKnown RBP12.26□□□□□ -0.45
VMP1-211ENST00000591315 CYP3A43Q9HB55 503 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 SAMSN1Q9NSI8 373 aaKnown RBP12.26□□□□□ -0.45
VMP1-211ENST00000591315 SORCS3Q9UPU3 1222 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.26□□□□□ -0.45
VMP1-211ENST00000591315 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 NOL4O94818 638 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 GNA14O95837 355 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 MBD3O95983 291 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 AFPP02771 609 aaKnown RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 ERCC5P28715 1186 aaPredicted RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 ADORA2BP29275 332 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 RPL10AP62906 217 aaKnown RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 CUL2Q13617 745 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 MAPRE1Q15691 268 aaKnown RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 TAF12Q16514 161 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 WDR44Q5JSH3 913 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 GPR158Q5T848 1215 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 GJB7Q6PEY0 223 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 TRIM67Q6ZTA4 783 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 RRAGAQ7L523 313 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 ITIH5Q86UX2 942 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 UNC93AQ86WB7 457 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 UBR7Q8N806 425 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 SLC4A11Q8NBS3 891 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 CCDC150Q8NCX0 1101 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 ZMIZ2Q8NF64 920 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 ZSCAN18Q8TBC5 510 aaPredicted RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 ASIC4Q96FT7 647 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 ASB16Q96NS5 453 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 SMOQ99835 787 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 SLC46A2Q9BY10 475 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
VMP1-211ENST00000591315 SLITRK6Q9H5Y7 841 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 CISHQ9NSE2 258 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 GDE1Q9NZC3 331 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 IGSF9Q9P2J2 1179 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 RAPGEFL1Q9UHV5 662 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 ZNF318Q5VUA4 2279 aa12.25□□□□□ -0.45
VMP1-211ENST00000591315 TMEM221A6NGB7 291 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 M0R296 226 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 MICAL2O94851 1124 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 PRAMEF12O95522 483 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 CFHP08603 1231 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 CSH1P0DML2 217 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 CSH2P0DML3 217 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 CCDC192P0DO97 292 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 MTIF2P46199 727 aaKnown RBP12.24□□□□□ -0.45
VMP1-211ENST00000591315 PGFP49763 221 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 RAD23BP54727 409 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 GPC5P78333 572 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 IFRD2Q12894 506 aaPredicted RBP12.24□□□□□ -0.45
VMP1-211ENST00000591315 GRM2Q14416 872 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 TPD52L1Q16890 204 aaPredicted RBP12.24□□□□□ -0.45
VMP1-211ENST00000591315 TXNDC8Q6A555 127 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 VSTM1Q6UX27 236 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 HFE2Q6ZVN8 426 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 LEMD2Q8NC56 503 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 EHBP1Q8NDI1 1231 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 SCAMP5Q8TAC9 235 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 SMARCD2Q92925 531 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 JAKMIP2Q96AA8 810 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 TNIP3Q96KP6 325 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 KREMEN1Q96MU8 473 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 SLC22A12Q96S37 553 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 NT5C1AQ9BXI3 368 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 DUSP12Q9UNI6 340 aa12.24□□□□□ -0.45
VMP1-211ENST00000591315 ZFP37Q9Y6Q3 630 aaPredicted RBP12.24□□□□□ -0.45
VMP1-211ENST00000591315 RNF225M0QZC1 329 aaPredicted RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 PMM2O15305 246 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 AP1G2O75843 785 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 FGFR1OPO95684 399 aaKnown RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 SLC9A1P19634 815 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 ACO1P21399 889 aaKnown RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 SIGLEC14Q08ET2 396 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 PPP1R26Q5T8A7 1209 aaPredicted RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 VITQ6UXI7 678 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 GPRIN1Q7Z2K8 1008 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 MAB21L3Q8N8X9 362 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 RIN3Q8TB24 985 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 CYFIP2Q96F07 1278 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 SPATA17Q96L03 361 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 C8orf48Q96LL4 319 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 MYRFLQ96LU7 910 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 HEXIM2Q96MH2 286 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms