RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 PILRBQ9UKJ0 227 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 PLXND1Q9Y4D7 1925 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 PCDHB5Q9Y5E4 795 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 A0A0B4J269 797 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 HNRNPDLO14979 420 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 ADAM23O75077 832 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 NOL4O94818 638 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 KLF8O95600 359 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 CSH1P0DML2 217 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 CSH2P0DML3 217 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 CD59P13987 128 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 ACAT1P24752 427 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 TIE1P35590 1138 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 ACOT2P49753 483 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 SLC12A3P55017 1021 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 NCKAP1LP55160 1127 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 ARSHQ5FYA8 562 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 KRT79Q5XKE5 535 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 SLC23A3Q6PIS1 610 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 C12orf40Q86WS4 652 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 THEM5Q8N1Q8 247 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 PNPLA1Q8N8W4 532 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 MDM1Q8TC05 714 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 MSTO1Q9BUK6 570 aa13.76□□□□□ -0.21
PRKCSH-210ENST00000589990 KALRNO60229 2985 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 TRAV19A0A0A6YYK7 116 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 ANKRD63C9JTQ0 380 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 MAP3K13O43283 966 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 SEC24BO95487 1268 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 CYP17A1P05093 508 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 USP17L7P0C7H9 530 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 TAF6P49848 677 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 SMTNP53814 917 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 WNT7BP56706 349 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 ANKRD1Q15327 319 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 PEAR1Q5VY43 1037 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 LYSMD4Q5XG99 296 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 SYT2Q8N9I0 419 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 HMGB4Q8WW32 186 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 C8orf76Q96K31 380 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 PKMYT1Q99640 499 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 FOXP1Q9H334 677 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 DPP3Q9NY33 737 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 DSEQ9UL01 958 aa13.75□□□□□ -0.21
PRKCSH-210ENST00000589990 PIGRP01833 764 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 OSTM1Q86WC4 334 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 MINDY1Q8N5J2 469 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 WHAMMQ8TF30 809 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 TRMT2BQ96GJ1 504 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 CRELD1Q96HD1 420 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 MYRFLQ96LU7 910 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 TMEM206Q9H813 350 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 BCCIPQ9P287 314 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 GTF3C4Q9UKN8 822 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 MYO18AQ92614 2054 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 TENM4Q6N022 2769 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 MAST4O15021 2626 aa13.74□□□□□ -0.21
PRKCSH-210ENST00000589990 CFAP46Q8IYW2 2715 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 TCRBV21S2A2A0A5A6 115 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 KPNA7A9QM74 516 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 SH3BP5O60239 455 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 PLA2G4BP0C869 781 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 USP46P62068 366 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 KDSRQ06136 332 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 NR1H3Q13133 447 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 MARCH9Q86YJ5 346 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 PDCL2Q8N4E4 241 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 HDDC3Q8N4P3 179 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 REEP2Q9BRK0 252 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 CCSER1Q9C0I3 900 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 SLC6A14Q9UN76 642 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 ARHGAP26Q9UNA1 814 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 ASXL3Q9C0F0 2248 aa13.73□□□□□ -0.21
PRKCSH-210ENST00000589990 PTPRBP23467 1997 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 H0Y626 953 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 K7ENM7 598 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 LEFTY2O00292 366 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 OPHN1O60890 802 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 ALDH1A2O94788 518 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 TRIM16O95361 564 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 NFATC1O95644 943 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 FTH1P19P0C7X4 201 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 HDCP19113 662 aa13.72□□□□□ -0.21
PRKCSH-210ENST00000589990 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms