RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 P4HA1P13674 534 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 CCNE1P24864 410 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 PIK3CAP42336 1068 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 CDR1P51861 262 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ZXDAP98168 799 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 VEPH1Q14D04 833 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TAF12Q16514 161 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 CAMK4Q16566 473 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TMEM31Q5JXX7 168 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 KLHL10Q6JEL2 608 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 PDZD4Q76G19 769 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TTC9BQ8N6N2 239 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 LEMD2Q8NC56 503 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 EDAQ92838 391 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 FGF13Q92913 245 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 IMPG2Q9BZV3 1241 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 MMRN2Q9H8L6 949 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 AVENQ9NQS1 362 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 ASAH2Q9NR71 780 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 CEP72Q9P209 647 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 IGSF9Q9P2J2 1179 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 EPS15L1Q9UBC2 864 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 FAM86C2PA6NEL3 165 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 GABRDO14764 452 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 STX10O60499 249 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 SOAT2O75908 522 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 STAU1O95793 577 aaKnown RBP11.08□□□□□ -0.64
SDF2-208ENST00000589788 MYL4P12829 197 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
SDF2-208ENST00000589788 GNL1P36915 607 aaPredicted RBP11.08□□□□□ -0.64
SDF2-208ENST00000589788 FKBP3Q00688 224 aaKnown RBP11.08□□□□□ -0.64
SDF2-208ENST00000589788 ENPEPQ07075 957 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 MORC3Q14149 939 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 MAPRE1Q15691 268 aaKnown RBP11.08□□□□□ -0.64
SDF2-208ENST00000589788 SGSM1Q2NKQ1 1148 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 ZACNQ401N2 412 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 SV2AQ7L0J3 742 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 ITIH5Q86UX2 942 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 SPATA2LQ8IUW3 424 aaPredicted RBP11.08□□□□□ -0.64
SDF2-208ENST00000589788 UBALD2Q8IYN6 164 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 OR6B3Q8NGW1 331 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 KBTBD7Q8WVZ9 684 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 TAF4BQ92750 862 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 NXPE3Q969Y0 559 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 SYT15Q9BQS2 421 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 XYLT2Q9H1B5 865 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 KCNK12Q9HB15 430 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 CDH9Q9ULB4 789 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 CTNND2Q9UQB3 1225 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 ASB3Q9Y575 518 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 NOTCH4Q99466 2003 aa11.08□□□□□ -0.64
SDF2-208ENST00000589788 C5orf42Q9H799 3197 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 BICDL2A1A5D9 508 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 SLC16A3O15427 465 aaKnown RBP11.07□□□□□ -0.64
SDF2-208ENST00000589788 HCRTO43612 131 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 TACC1O75410 805 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 VNN1O95497 513 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 HLA-DRAP01903 254 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 PDGFRBP09619 1106 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 HAPLN1P10915 354 aaPredicted RBP11.07□□□□□ -0.64
SDF2-208ENST00000589788 LMO2P25791 158 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 GCLMP48507 274 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
SDF2-208ENST00000589788 SEC13P55735 322 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 TDGQ13569 410 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 SLC5A9Q2M3M2 681 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 C1orf220Q5T0J3 134 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 TCERG1LQ5VWI1 586 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 SCARA5Q6ZMJ2 495 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 MTSS1LQ765P7 747 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 NPAS3Q8IXF0 933 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 TRIML1Q8N9V2 468 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 NELFBQ8WX92 580 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 MCRS1Q96EZ8 462 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 MRPL45Q9BRJ2 306 aaKnown RBP11.07□□□□□ -0.64
SDF2-208ENST00000589788 PI4K2AQ9BTU6 479 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 TMLHEQ9NVH6 421 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 GDE1Q9NZC3 331 aa11.07□□□□□ -0.64
SDF2-208ENST00000589788 VCANP13611 3396 aa11.06□□□□□ -0.64
SDF2-208ENST00000589788 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
SDF2-208ENST00000589788 A8MXQ7 604 aa11.06□□□□□ -0.64
SDF2-208ENST00000589788 LILRA1O75019 489 aa11.06□□□□□ -0.64
SDF2-208ENST00000589788 ATP2C2O75185 946 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms