RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	ANKRD33	Q7Z3H0	272 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	TMEM110	Q86TL2	294 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	METTL23	Q86XA0	190 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	CCDC50	Q8IVM0	306 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	CCDC26	Q8TAB7	109 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	HDAC7	Q8WUI4	952 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	MAIP1	Q8WWC4	291 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	RBM41	Q96IZ5	413 aa	Known RBP	13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	HNRNPAB	Q99729	332 aa	Known RBP	13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	LPIN3	Q9BQK8	851 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	SYT15	Q9BQS2	421 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	KANSL3	Q9P2N6	904 aa		13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	DMGDH	Q9UI17	866 aa	Known RBP	13.48	□□□□□ -0.25
RAB8A-205	ENST00000589697	TSC2	P49815	1807 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	DCDC2C	A8MYV0	355 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	TULP2	O00295	520 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	PIK3R2	O00459	728 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ZMYND10	O75800	440 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	DES	P17661	470 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	IGFBP6	P24592	240 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ACAT1	P24752	427 aa	Known RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	TNFRSF8	P28908	595 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	TKT	P29401	623 aa	Known RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	PLA2G4A	P47712	749 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ATN1	P54259	1190 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	SMC1A	Q14683	1233 aa	Known RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	TIGD5	Q53EQ6	642 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ODF2	Q5BJF6	829 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	MDH1B	Q5I0G3	518 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ZFYVE27	Q5T4F4	411 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	DCLRE1A	Q6PJP8	1040 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	OLFML1	Q6UWY5	402 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	MAATS1	Q7Z4T9	603 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	POLN	Q7Z5Q5	900 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	IFT20	Q8IY31	132 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	EMC1	Q8N766	993 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	DBF4B	Q8NFT6	615 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	EXD1	Q8NHP7	514 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	MED10	Q9BTT4	135 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	HIPK3	Q9H422	1215 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	ELAC1	Q9H777	363 aa	Known RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	DDX56	Q9NY93	547 aa	Known RBP	13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	CDH9	Q9ULB4	789 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	BRCA2	P51587	3418 aa		13.47	□□□□□ -0.25
RAB8A-205	ENST00000589697	XPO1	O14980	1071 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	PHF2	O75151	1096 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	ATP2C2	O75185	946 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	SEC31A	O94979	1220 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	PARN	O95453	639 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	KRT1	P04264	644 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	CYP11A1	P05108	521 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	NPR3	P17342	541 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	GPD1	P21695	349 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	SCNN1A	P37088	669 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	MRPS25	P82663	173 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	RNASEL	Q05823	741 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	HADH	Q16836	314 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	PAN2	Q504Q3	1202 aa	Known RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	SLC39A5	Q6ZMH5	540 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	ABI1	Q8IZP0	508 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	FUK	Q8N0W3	1084 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	HSFY1	Q96LI6	401 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	CRISPLD2	Q9H0B8	497 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	ASNSD1	Q9NWL6	643 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	ZNF446	Q9NWS9	450 aa		13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.46	□□□□□ -0.25
RAB8A-205	ENST00000589697		M0QZQ0	153 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	FSCN2	O14926	492 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	RNF8	O76064	485 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	KRT7	P08729	469 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	FAM200B	P0CF97	657 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	CHRNA3	P32297	505 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	ZNF143	P52747	638 aa	Predicted RBP	13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	SLC6A3	Q01959	620 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	PLCB3	Q01970	1234 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	GUCY2D	Q02846	1103 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	DSC1	Q08554	894 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	CTU1	Q7Z7A3	348 aa	Known RBP	13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	RCOR2	Q8IZ40	523 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	HASPIN	Q8TF76	798 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	RSPH1	Q8WYR4	309 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	ZNF333	Q96JL9	665 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	SUSD3	Q96L08	255 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	RUNDC3B	Q96NL0	473 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	FAM193B	Q96PV7	902 aa	Predicted RBP	13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	CNPY3	Q9BT09	278 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	DUSP16	Q9BY84	665 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	CRTAC1	Q9NQ79	661 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	KRT82	Q9NSB4	513 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	AMACR	Q9UHK6	382 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	NR2E1	Q9Y466	385 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	PCDHB7	Q9Y5E2	793 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	C2CD4B	A6NLJ0	364 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697		I3L4J1	428 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	PAPSS1	O43252	624 aa	Predicted RBP	13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	LRCH4	O75427	683 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	GLI1	P08151	1106 aa		13.45	□□□□□ -0.26
RAB8A-205	ENST00000589697	TCF4	P15884	667 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms