RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 ZNF560Q96MR9 790 aa19.27■□□□□ 0.68
CXXC1-211ENST00000589548 TMEM8BA6NDV4 472 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 SRRM3A6NNA2 597 aaPredicted RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 CHRM1P11229 460 aaPredicted RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 ADSSP30520 456 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 DHPSP49366 369 aaPredicted RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 RPL10AP62906 217 aaKnown RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 ZXDBP98169 803 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 UAP1L1Q3KQV9 507 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 C2orf27AQ580R0 203 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 INTS6LQ5JSJ4 861 aaKnown RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 KIAA1211LQ6NV74 962 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 C11orf74Q86VG3 221 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 SFTPA1Q8IWL2 248 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 CCDC33Q8N5R6 958 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 ZSWIM2Q8NEG5 633 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 SH3RF2Q8TEC5 729 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 ZHX3Q9H4I2 956 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 ABCB6Q9NP58 842 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 DDX43Q9NXZ2 648 aaKnown RBP19.26■□□□□ 0.67
CXXC1-211ENST00000589548 GTF3C4Q9UKN8 822 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 MMP17Q9ULZ9 603 aa19.26■□□□□ 0.67
CXXC1-211ENST00000589548 TCF3P15923 654 aa19.25■□□□□ 0.67
CXXC1-211ENST00000589548 ARL6IP4Q66PJ3 421 aaKnown RBP19.25■□□□□ 0.67
CXXC1-211ENST00000589548 MCTP1Q6DN14 999 aa19.25■□□□□ 0.67
CXXC1-211ENST00000589548 TMEM92Q6UXU6 159 aa19.25■□□□□ 0.67
CXXC1-211ENST00000589548 OLIG1Q8TAK6 271 aa19.25■□□□□ 0.67
CXXC1-211ENST00000589548 PIGKQ92643 395 aa19.25■□□□□ 0.67
CXXC1-211ENST00000589548 ACBD6Q9BR61 282 aa19.25■□□□□ 0.67
CXXC1-211ENST00000589548 NBEAQ8NFP9 2946 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 PCDH15Q96QU1 1955 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 PLCG1P19174 1290 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 POU5F1Q01860 360 aaKnown RBP19.24■□□□□ 0.67
CXXC1-211ENST00000589548 GRIN1Q05586 938 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 MESP2Q0VG99 397 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 CRY1Q16526 586 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 SLFN12LQ6IEE8 588 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 FRMD1Q8N878 549 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 C1orf127Q8N9H9 656 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 CXorf38Q8TB03 319 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 RLN3Q8WXF3 142 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 ZCCHC14Q8WYQ9 949 aaKnown RBP19.24■□□□□ 0.67
CXXC1-211ENST00000589548 RAD54LQ92698 747 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 KIF2CQ99661 725 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 ST6GALNAC4Q9H4F1 302 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 EVLQ9UI08 416 aaPredicted RBP19.24■□□□□ 0.67
CXXC1-211ENST00000589548 ARHGAP26Q9UNA1 814 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 AGAP1Q9UPQ3 857 aa19.24■□□□□ 0.67
CXXC1-211ENST00000589548 SLC26A4O43511 780 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 HYAL3O43820 417 aaPredicted RBP19.23■□□□□ 0.67
CXXC1-211ENST00000589548 TBCAO75347 108 aaKnown RBP19.23■□□□□ 0.67
CXXC1-211ENST00000589548 PPP1R37O75864 691 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 ITGB3P05106 788 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 KRT18P05783 430 aaKnown RBP19.23■□□□□ 0.67
CXXC1-211ENST00000589548 PNPLA4P41247 253 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 NR1H3Q13133 447 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 CFAP221Q4G0U5 840 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 TRIM61Q5EBN2 209 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 NT5DC4Q86YG4 428 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 CALML4Q96GE6 196 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 AK8Q96MA6 479 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 FNBP1Q96RU3 617 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 TMEM74BQ9NUR3 256 aa19.23■□□□□ 0.67
CXXC1-211ENST00000589548 ITPR1Q14643 2758 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 IL18RAPO95256 599 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 NFATC1O95644 943 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 CYP17A1P05093 508 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 P2RY2P41231 377 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 TFAMQ00059 246 aaKnown RBP19.22■□□□□ 0.67
CXXC1-211ENST00000589548 MYL7Q01449 175 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 KCNA1Q09470 495 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 KCNB1Q14721 858 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 ARMCX6Q7L4S7 300 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 TTC30AQ86WT1 665 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 SCN4BQ8IWT1 228 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 POMGNT1Q8WZA1 660 aa19.22■□□□□ 0.67
CXXC1-211ENST00000589548 MBD1Q9UIS9 605 aaPredicted RBP19.22■□□□□ 0.67
CXXC1-211ENST00000589548 ATXN2Q99700 1313 aaKnown RBP19.22■□□□□ 0.67
CXXC1-211ENST00000589548 SETXQ7Z333 2677 aaKnown RBP19.21■□□□□ 0.67
CXXC1-211ENST00000589548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 GABRDO14764 452 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 HUS1O60921 280 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 HDCP19113 662 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 ABCD1P33897 745 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 UBA7P41226 1012 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 PTGER3P43115 390 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 MAPK8P45983 427 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 USP46P62068 366 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 RING1Q06587 406 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 ZNF720Q7Z2F6 126 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 SFR1Q86XK3 245 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 SPATA2LQ8IUW3 424 aaPredicted RBP19.21■□□□□ 0.67
CXXC1-211ENST00000589548 BRSK2Q8IWQ3 736 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 TMEFF1Q8IYR6 380 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 TMEM86AQ8N2M4 240 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 ALLCQ8N6M5 410 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 CCDC26Q8TAB7 109 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 STRA6Q9BX79 667 aa19.21■□□□□ 0.67
CXXC1-211ENST00000589548 SIX4Q9UIU6 781 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms