RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 MAGED2Q9UNF1 606 aaPredicted RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 TRAF3IP3Q9Y228 551 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 KIAA1549LQ6ZVL6 1849 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 CHADO15335 359 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 NOL4O94818 638 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 ADRB1P08588 477 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 CYP2F1P24903 491 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 WEE1P30291 646 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 PDE6CP51160 858 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM160A1Q05DH4 1040 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 ENPEPQ07075 957 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 ARHGAP29Q52LW3 1261 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 LIMS2Q7Z4I7 341 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 TAF4BQ92750 862 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 NELL2Q99435 816 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 IER2Q9BTL4 223 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 DDX23Q9BUQ8 820 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 PLA2G2FQ9BZM2 168 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 FOXQ1Q9C009 403 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 VRTNQ9H8Y1 702 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 LTB4R2Q9NPC1 389 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 TRPV5Q9NQA5 729 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 THG1LQ9NWX6 298 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-211ENST00000589347 MYBPHLA2RUH7 354 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 A8MXQ7 604 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 STX10O60499 249 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 KINO60870 393 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 DCNP07585 359 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 EPB41P11171 864 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 GLULP15104 373 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 GNL1P36915 607 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 GRIK1P39086 918 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 VIPR2P41587 438 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 CASP4P49662 377 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 GPR15P49685 360 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 VAMP7P51809 220 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 KPNA1P52294 538 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 NLRP12P59046 1061 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 MYL6P60660 151 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 CLDN10P78369 228 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 FCHO2Q0JRZ9 810 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 STIM1Q13586 685 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 DDR2Q16832 855 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 EDRF1Q3B7T1 1238 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 STXBP5Q5T5C0 1151 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 SCARA5Q6ZMJ2 495 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 CELF5Q8N6W0 485 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 BPIFB1Q8TDL5 484 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 SMARCE1Q969G3 411 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 TNIP3Q96KP6 325 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 SPATA17Q96L03 361 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 ZSWIM3Q96MP5 696 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 TIGD1Q96MW7 591 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 GSDMAQ96QA5 445 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 C8orf33Q9H7E9 229 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 PIAS3Q9Y6X2 628 aa11.3□□□□□ -0.6
CLPTM1-211ENST00000589347 TRAV19A0A0A6YYK7 116 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM170BA6NMN3 283 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 IKBKBO14920 756 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 CETN3O15182 167 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 C4BPAP04003 597 aaKnown RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 PDGFRBP09619 1106 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 BDNFP23560 247 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 PPP1R2P41236 205 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 CDR1P51861 262 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 PNOCQ13519 176 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 LRRC32Q14392 662 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 SGSM1Q2NKQ1 1148 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 ZACNQ401N2 412 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF658Q5TYW1 1059 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 C1orf210Q8IVY1 113 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 MAML2Q8IZL2 1156 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 CMTM8Q8IZV2 173 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 B3GALNT2Q8NCR0 500 aa11.29□□□□□ -0.6
CLPTM1-211ENST00000589347 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms