RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 XYLT2Q9H1B5 865 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 DPEP3Q9H4B8 488 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 NDRG2Q9UN36 371 aaKnown RBP12.34□□□□□ -0.43
RFX1-204ENST00000588885 FRMD4BQ9Y2L6 1034 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 COL4A3Q01955 1670 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 VNN1O95497 513 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 F11P03951 625 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 C4BPAP04003 597 aaKnown RBP12.33□□□□□ -0.44
RFX1-204ENST00000588885 CSH1P0DML2 217 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 CSH2P0DML3 217 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 PTPN1P18031 435 aaKnown RBP12.33□□□□□ -0.44
RFX1-204ENST00000588885 BMP6P22004 513 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 GRIK1P39086 918 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 SOX9P48436 509 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 NCOA4Q13772 614 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 MORC3Q14149 939 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 ZNF699Q32M78 642 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 ZNF852Q6ZMS4 543 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 C4orf50Q6ZRC1 276 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 SPATA18Q8TC71 538 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 DEPDC1BQ8WUY9 529 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 E2F7Q96AV8 911 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 EEF2KMTQ96G04 330 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
RFX1-204ENST00000588885 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 TRPC7Q9HCX4 862 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 ABCB6Q9NP58 842 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 LTB4R2Q9NPC1 389 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 SPATA6Q9NWH7 488 aaPredicted RBP12.33□□□□□ -0.44
RFX1-204ENST00000588885 DLGAP2Q9P1A6 1054 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 CACNA1IQ9P0X4 2223 aa12.33□□□□□ -0.44
RFX1-204ENST00000588885 PATJQ8NI35 1801 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 A8MXQ7 604 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 CLDN5O00501 218 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 TACC1O75410 805 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 AKAP3O75969 853 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 KIF20AO95235 890 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 TRIM49P0CI25 452 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 TRIM49CP0CI26 452 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 NR2F2P24468 414 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 TARSP26639 723 aaKnown RBP12.32□□□□□ -0.44
RFX1-204ENST00000588885 ATICP31939 592 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 NBL1P41271 181 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
RFX1-204ENST00000588885 ORC1Q13415 861 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 ADAM9Q13443 819 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 KCNB1Q14721 858 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 SPOPLQ6IQ16 392 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 C1orf210Q8IVY1 113 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 CMTM8Q8IZV2 173 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 CSGALNACT1Q8TDX6 532 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 MRPS31Q92665 395 aaKnown RBP12.32□□□□□ -0.44
RFX1-204ENST00000588885 DNASE1L2Q92874 299 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 CYP2S1Q96SQ9 504 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 TRAF3IP3Q9Y228 551 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 CCL26Q9Y258 94 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 PIAS3Q9Y6X2 628 aa12.32□□□□□ -0.44
RFX1-204ENST00000588885 F5P12259 2224 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 FRYLO94915 3013 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 PRR23AA6NEV1 266 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 CHADO15335 359 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 NOL4O94818 638 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 CCNE1P24864 410 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 ANXA13P27216 316 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 AVPR1AP37288 418 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 MAGEA11P43364 429 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 GCLMP48507 274 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 VAMP7P51809 220 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 AP3M2P53677 418 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 CACNA2D1P54289 1103 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 USP46P62068 366 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 CLDN10P78369 228 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 TNK2Q07912 1038 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 MAPRE1Q15691 268 aaKnown RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 ZC3H14Q6PJT7 736 aaKnown RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 SV2AQ7L0J3 742 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 MON1AQ86VX9 555 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 GUF1Q8N442 669 aaKnown RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms