RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TFAP2BQ92481 460 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 SMARCD1Q96GM5 515 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 ZSWIM1Q9BR11 485 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 CEP72Q9P209 647 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 UNC80Q8N2C7 3258 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 DENND4AQ7Z401 1863 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 NOTCH4Q99466 2003 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 CYP26A1O43174 497 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 TFF2Q03403 129 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 PLD1Q13393 1074 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 ARHGAP17Q68EM7 881 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 VSTM1Q6UX27 236 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GPIHBP1Q8IV16 184 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 FAM71AQ8IYT1 594 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GPR152Q8TDT2 470 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 SMG7Q92540 1137 aaKnown RBP20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 SPAG5Q96R06 1193 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 ADAM7Q9H2U9 754 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 F8VP50 259 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 XYLBO75191 536 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 AP1G2O75843 785 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 POU2F2P09086 479 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GNA15P30679 374 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 CLCN1P35523 988 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GRIK1P39086 918 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 EPHB3P54753 998 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 RPL10AP62906 217 aaKnown RBP20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 ITIH3Q06033 890 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GOLGA7BQ2TAP0 167 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 CACNA2D4Q7Z3S7 1137 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GPR149Q86SP6 731 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 GIPC2Q8TF65 315 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 KCNK16Q96T55 309 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 SMOQ99835 787 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 TTYH3Q9C0H2 523 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 HCFC1R1Q9NWW0 138 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 THEGQ9P2T0 379 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 TSPAN16Q9UKR8 245 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 KIAA1257Q9ULG3 409 aa20.12■□□□□ 0.81
CLPTM1-209ENST00000588855 O00370 1275 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 BEST1O76090 585 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 FAM200BP0CF97 657 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 SSTR3P32745 418 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 LEXMQ3ZCV2 418 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 CES5AQ6NT32 575 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 CLEC20AQ6ZU45 233 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 ZMIZ2Q8NF64 920 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 PIDD1Q9HB75 910 aa20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 USP15Q9Y4E8 981 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 ZNF638Q14966 1978 aaKnown RBP20.11■□□□□ 0.81
CLPTM1-209ENST00000588855 GRXCR2A6NFK2 248 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 TRIM66O15016 1216 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 GFPT2O94808 682 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 MAP3K7CLP57077 242 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 VEPH1Q14D04 833 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 SMYD5Q6GMV2 418 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 SLC47A2Q86VL8 602 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 TTC30AQ86WT1 665 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 ELMOD1Q8N336 334 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 BAP1Q92560 729 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 C8orf48Q96LL4 319 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 CSNK1G1Q9HCP0 422 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 DMAP1Q9NPF5 467 aaPredicted RBP20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 ITIH6Q6UXX5 1313 aa20.1■□□□□ 0.81
CLPTM1-209ENST00000588855 THAP12O43422 761 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 MBTPS2O43462 519 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 NPR3P17342 541 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 ANXA13P27216 316 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 SOX5P35711 763 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 STAT1P42224 750 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 NTHL1P78549 312 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 SMAD4Q13485 552 aaKnown RBP20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 MTMR3Q13615 1198 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 FIGNQ5HY92 759 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 LCLAT1Q6UWP7 414 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 GRASPQ7Z6J2 395 aaPredicted RBP20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 PSMG2Q969U7 264 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 ZNF512Q96ME7 567 aaPredicted RBP20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 DUSP16Q9BY84 665 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 DNMT3BQ9UBC3 853 aaKnown RBP20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 OBSL1O75147 1896 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 MYO16Q9Y6X6 1858 aa20.09■□□□□ 0.81
CLPTM1-209ENST00000588855 SLC38A8A6NNN8 435 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 MICAL2O94851 1124 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 PTK2Q05397 1052 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 CNGA2Q16280 664 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 CYP26C1Q6V0L0 522 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 DNAJB7Q7Z6W7 309 aaPredicted RBP20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 VSTM4Q8IW00 320 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 HS6ST3Q8IZP7 471 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 ANKRD52Q8NB46 1076 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 ZNF606Q8WXB4 792 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 SUSD6Q92537 303 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 SPATA17Q96L03 361 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 CORO1BQ9BR76 489 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 NUP58Q9BVL2 599 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 HESX1Q9UBX0 185 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms