RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 GFRA3O60609 400 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 IPO7O95373 1038 aaKnown RBP10.96□□□□□ -0.65
APOC1-203ENST00000588802 NFICP08651 508 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 POU2F2P09086 479 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 LAMP2P13473 410 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 HOXA9P31269 272 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 GRM5P41594 1212 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 PRKCIP41743 596 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 VAV2P52735 878 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 KRT83P78385 493 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 PTK2Q05397 1052 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 SPA17Q15506 151 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 SCARA3Q6AZY7 606 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 CD300LGQ6UXG3 332 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 WDR49Q8IV35 697 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 ITFG1Q8TB96 612 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 ING5Q8WYH8 240 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 TATDN2Q93075 761 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 C18orf25Q96B23 403 aaPredicted RBP10.96□□□□□ -0.65
APOC1-203ENST00000588802 ZMAT2Q96NC0 199 aaKnown RBP10.96□□□□□ -0.65
APOC1-203ENST00000588802 ACAP3Q96P50 834 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 RTP3Q9BQQ7 232 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.96□□□□□ -0.65
APOC1-203ENST00000588802 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.65
APOC1-203ENST00000588802 WNT16Q9UBV4 365 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 DNAI1Q9UI46 699 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 NUMBLQ9Y6R0 609 aa10.96□□□□□ -0.65
APOC1-203ENST00000588802 DENND4AQ7Z401 1863 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 A0A087X0T9 212 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 FAM170AA1A519 330 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 FOXN3O00409 490 aaPredicted RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 PODXLO00592 558 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 PHACTR2O75167 634 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 IL18RAPO95256 599 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 LCA5LO95447 670 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 HNRNPA1P09651 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
APOC1-203ENST00000588802 TMEM191BP0C7N4 346 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 FAM228BP0C875 321 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 FGFR3P22607 806 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 GNG11P61952 73 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 ETF1P62495 437 aaKnown RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 TFAMQ00059 246 aaKnown RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 SURF1Q15526 300 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 UPP1Q16831 310 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 SLC35F6Q8N357 371 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 SLC20A1Q8WUM9 679 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 UROC1Q96N76 676 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 WDR24Q96S15 920 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 ARID3AQ99856 593 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 LACRTQ9GZZ8 138 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 APOBEC3GQ9HC16 384 aaKnown RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 MTRRQ9UBK8 725 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 GUCA1BQ9UMX6 200 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 NUB1Q9Y5A7 615 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 PCDHA13Q9Y5I0 950 aa10.95□□□□□ -0.66
APOC1-203ENST00000588802 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.95□□□□□ -0.66
APOC1-203ENST00000588802 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.661e-7■■■■■ 82.7
APOC1-203ENST00000588802 TRAPPC3O43617 180 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 XYLBO75191 536 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 CALCAP01258 141 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 DCNP07585 359 aaKnown RBP10.94□□□□□ -0.66
APOC1-203ENST00000588802 CLTAP09496 248 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 SRFP11831 508 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 AOC1P19801 751 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 USP8P40818 1118 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 MAGEA1P43355 309 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 MFAP3P55082 362 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
APOC1-203ENST00000588802 GPC5P78333 572 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 HTR4Q13639 388 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 NCOA4Q13772 614 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 RAB33AQ14088 237 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 ZNF569Q5MCW4 686 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
APOC1-203ENST00000588802 CCDC122Q5T0U0 273 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 ASCL5Q7RTU5 278 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 SHC3Q92529 594 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 FGF14Q92915 247 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 MCRS1Q96EZ8 462 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 ANKRD36BP1Q96IX9 119 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 SNX27Q96L92 541 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 KXD1Q9BQD3 176 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 TBC1D17Q9HA65 648 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 SLC38A7Q9NVC3 462 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 DNMT3BQ9UBC3 853 aaKnown RBP10.94□□□□□ -0.66
APOC1-203ENST00000588802 CDH7Q9ULB5 785 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 MYH10P35580 1976 aa10.94□□□□□ -0.66
APOC1-203ENST00000588802 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms