RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 LURAP1Q96LR2 239 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 CEP89Q96ST8 783 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 JPH2Q9BR39 696 aaPredicted RBP7.59□□□□□ -1.19
TPM4-210ENST00000588507 IL21Q9HBE4 155 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 ZNF71Q9NQZ8 489 aaPredicted RBP7.59□□□□□ -1.19
TPM4-210ENST00000588507 TBC1D22BQ9NU19 505 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 ENTPD4Q9Y227 616 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 PCDHGA4Q9Y5G9 962 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 CSMD2Q7Z408 3487 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 RAB11FIP3O75154 756 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 NPTXRO95502 500 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 NTSR1P30989 418 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 GRIA2P42262 883 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 WASP42768 502 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 SLC6A11P48066 632 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 CLCNKBP51801 687 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 CYP4F2P78329 520 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 SRSF6Q13247 344 aaKnown RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 GAB4Q2WGN9 574 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 KIAA1324Q6UXG2 1013 aaKnown RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 NIPA1Q7RTP0 329 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 ARL14Q8N4G2 192 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 TMEM57Q8N5G2 664 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 EFCAB3Q8N7B9 438 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 TTC16Q8NEE8 873 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 C9orf43Q8TAL5 461 aaPredicted RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 PDCD6IPQ8WUM4 868 aaKnown RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 PRR11Q96HE9 360 aaPredicted RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 MRGPRX1Q96LB2 322 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 HEXIM2Q96MH2 286 aaKnown RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 UROC1Q96N76 676 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 PGLYRP2Q96PD5 576 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 ELF4Q99607 663 aaPredicted RBP7.58□□□□□ -1.2
TPM4-210ENST00000588507 LINC00597Q9H2U6 94 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 CRISPLD1Q9H336 500 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 TM9SF3Q9HD45 589 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 TJP2Q9UDY2 1190 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 PCDHGA8Q9Y5G5 932 aa7.58□□□□□ -1.2
TPM4-210ENST00000588507 NEDD4P46934 1319 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 VNN2O95498 520 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 LDLRP01130 860 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 C4BPAP04003 597 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 OXTRP30559 389 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 EIF2DP41214 584 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 MLLT3P42568 568 aaPredicted RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 FAM160A1Q05DH4 1040 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 SLFN5Q08AF3 891 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 KLRB1Q12918 225 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 ORC1Q13415 861 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 ZNF77Q15935 545 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 UPP1Q16831 310 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 KCNT1Q5JUK3 1230 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 PRAMEF14Q5SWL7 426 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 IFIT1BQ5T764 474 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 SDE2Q6IQ49 451 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 SLC27A1Q6PCB7 646 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 CXXC5Q7LFL8 322 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 ADAT2Q7Z6V5 191 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 METTL3Q86U44 580 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 PLA2G4DQ86XP0 818 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 TBC1D10CQ8IV04 446 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 PRPF31Q8WWY3 499 aaKnown RBP7.57□□□□□ -1.2
TPM4-210ENST00000588507 HTR3CQ8WXA8 447 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 SNX19Q92543 992 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 ZNF577Q9BSK1 485 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 SLC6A17Q9H1V8 727 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 CBX8Q9HC52 389 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 ITM2CQ9NQX7 267 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 ARHGEF4Q9NR80 690 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 SLC27A5Q9Y2P5 690 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 SLCO1B1Q9Y6L6 691 aa7.57□□□□□ -1.2
TPM4-210ENST00000588507 JMJD1CQ15652 2540 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 COL6A5A8TX70 2615 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
TPM4-210ENST00000588507 BTBD18B2RXH4 712 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 TBX3O15119 743 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 YKT6O15498 198 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 WIPF1O43516 503 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 OPA1O60313 960 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 NOBOXO60393 691 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 THEGLP0DJG4 465 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 ARF4P18085 180 aaPredicted RBP7.56□□□□□ -1.2
TPM4-210ENST00000588507 C21orf59P57076 290 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 LAMTOR4Q0VGL1 99 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 VEPH1Q14D04 833 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 TGIF1Q15583 401 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 TAF12Q16514 161 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 UGCGQ16739 394 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 XKR3Q5GH77 459 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 MANEAQ5SRI9 462 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 TXNDC8Q6A555 127 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 LAYNQ6UX15 382 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 MON1AQ86VX9 555 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 RNF149Q8NC42 400 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 PSPC1Q8WXF1 523 aaKnown RBP7.56□□□□□ -1.2
TPM4-210ENST00000588507 ERLEC1Q96DZ1 483 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 RRP36Q96EU6 259 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms