RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 MRPS5P82675 430 aaKnown RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 SMAD4Q13485 552 aaKnown RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 TRIM14Q14142 442 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 RARS2Q5T160 578 aaKnown RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 SPECC1LQ69YQ0 1117 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 GJB7Q6PEY0 223 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 TMC5Q6UXY8 1006 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 DNAJB7Q7Z6W7 309 aaPredicted RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF677Q86XU0 584 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 SMG7Q92540 1137 aaKnown RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 KAT5Q92993 513 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 PSMG2Q969U7 264 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 TRIM5Q9C035 493 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 XPO4Q9C0E2 1151 aaKnown RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 DMAP1Q9NPF5 467 aaPredicted RBP9.61□□□□□ -0.87
CIRBP-218ENST00000588344 THEGQ9P2T0 379 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 YIPF1Q9Y548 306 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 CEP83Q9Y592 693 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 FHOD1Q9Y613 1164 aa9.61□□□□□ -0.87
CIRBP-218ENST00000588344 ANK1P16157 1881 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 NLRC5Q86WI3 1866 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 RNF225M0QZC1 329 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 CYP26A1O43174 497 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 RFPL2O75678 378 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 RTN3O95197 1032 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 VNN2O95498 520 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 SETSIPP0DME0 302 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 FERP16591 822 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 NPR3P17342 541 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 KRT9P35527 623 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 BCAT1P54687 386 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 EPHA5P54756 1037 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 JAM2P57087 298 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 APBA1Q02410 837 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 DLX2Q07687 328 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 DENND5BQ6ZUT9 1274 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 PAQR9Q6ZVX9 377 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 GAS2L3Q86XJ1 694 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 SCN4BQ8IWT1 228 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 NUP93Q8N1F7 819 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 STK32AQ8WU08 396 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF606Q8WXB4 792 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 SUSD6Q92537 303 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 SYN2Q92777 582 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF707Q96C28 371 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 TRMT2BQ96GJ1 504 aaKnown RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 MYRFLQ96LU7 910 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF518BQ9C0D4 1074 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 GPR88Q9GZN0 384 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 CRISPLD1Q9H336 500 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 FBXO44Q9H4M3 255 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 NLRC4Q9NPP4 1024 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 ASAH2Q9NR71 780 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 CAPN11Q9UMQ6 739 aa9.6□□□□□ -0.87
CIRBP-218ENST00000588344 BZW2Q9Y6E2 419 aaKnown RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 ZFP37Q9Y6Q3 630 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-218ENST00000588344 PDCD11Q14690 1871 aaKnown RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CLUHO75153 1309 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 F8VP50 259 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 H3BQ06 376 aaPredicted RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 O00370 1275 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CLDN5O00501 218 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 XPO1O14980 1071 aaKnown RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CCL16O15467 120 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 THAP12O43422 761 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 MBTPS2O43462 519 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CCDC130P13994 396 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CYP11B1P15538 503 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 PFKLP17858 780 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 ADORA2BP29275 332 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CDC25CP30307 473 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CLCN1P35523 988 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 KLK7P49862 253 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 PDE6CP51160 858 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 MAP3K7CLP57077 242 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 ZBED6P86452 979 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 RBM10P98175 930 aaKnown RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 BST2Q10589 180 aaKnown RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 ORC1Q13415 861 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 CBX2Q14781 532 aaPredicted RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 SMAD2Q15796 467 aaKnown RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 DDR2Q16832 855 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 TSR1Q2NL82 804 aaKnown RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 PPP1R2P3Q6NXS1 205 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 PDZD4Q76G19 769 aaPredicted RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 C12orf76Q8N812 135 aaPredicted RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 PDZD8Q8NEN9 1154 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.59□□□□□ -0.87
CIRBP-218ENST00000588344 KCTD13Q8WZ19 329 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 OVCA2Q8WZ82 227 aa9.59□□□□□ -0.87
CIRBP-218ENST00000588344 MRFAP1L1Q96HT8 127 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms