RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PKD1L2Q7Z442 2459 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 MYMKA6NI61 221 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 PATE3B3GLJ2 98 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 OLFM2O95897 454 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 DDIT3P35638 169 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 USP46P62068 366 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 RPL10AP62906 217 aaKnown RBP14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 CREB5Q02930 508 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 L1TD1Q5T7N2 865 aaKnown RBP14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 CC2D1AQ6P1N0 951 aaPredicted RBP14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 TMEM86AQ8N2M4 240 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 ARL14EPQ8N8R7 260 aaPredicted RBP14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 MDGA1Q8NFP4 955 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 OLIG1Q8TAK6 271 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 SPATA18Q8TC71 538 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 SH3RF2Q8TEC5 729 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 EPSTI1Q96J88 318 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 CBWD1Q9BRT8 395 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 TPSD1Q9BZJ3 242 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 TRPC7Q9HCX4 862 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 UXTQ9UBK9 157 aaPredicted RBP14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 AGAP1Q9UPQ3 857 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 NME7Q9Y5B8 376 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 ABCA7Q8IZY2 2146 aa14.81□□□□□ -0.04
CLPTM1-208ENST00000588274 PLXND1Q9Y4D7 1925 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 TRAV19A0A0A6YYK7 116 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 FRMD3A2A2Y4 597 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 C4orf47A7E2U8 309 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 ATP2C2O75185 946 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 CAVIN2O95810 425 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 TOP3BO95985 862 aaKnown RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 KRT18P05783 430 aaKnown RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 CKMP06732 381 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 USP17L7P0C7H9 530 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 MAGEA11P43364 429 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 NOVA1P51513 510 aaKnown RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 TFAMQ00059 246 aaKnown RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 AMPD2Q01433 879 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 SF3A1Q15459 793 aaKnown RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 ELF2Q15723 593 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 DYMQ7RTS9 669 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 ADGRF2Q8IZF7 708 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 TOP6BLQ8N6T0 577 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 CNOT6LQ96LI5 555 aaKnown RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 MTMR12Q9C0I1 747 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 CRTAC1Q9NQ79 661 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 OLFML3Q9NRN5 406 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 TMEM30AQ9NV96 361 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 RBAKQ9NYW8 714 aaPredicted RBP14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 ITGA11Q9UKX5 1188 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 INVSQ9Y283 1065 aa14.8□□□□□ -0.04
CLPTM1-208ENST00000588274 RHOBTB1O94844 696 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 CYP17A1P05093 508 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 LMO2P25791 158 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 IFNAR2P48551 515 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 RABEP1Q15276 862 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 UNQ6494/PRO21346Q6UXR6 183 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 TMEM92Q6UXU6 159 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 TSTD1Q8NFU3 115 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 OR5B17Q8NGF7 314 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 TTLL2Q9BWV7 592 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 PDE11AQ9HCR9 933 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 SEL1LQ9UBV2 794 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 STK17AQ9UEE5 414 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 FBXO2Q9UK22 296 aaPredicted RBP14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 MMP17Q9ULZ9 603 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 SNX9Q9Y5X1 595 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 BAHCC1Q9P281 2608 aa14.79□□□□□ -0.04
CLPTM1-208ENST00000588274 A0A087X0B3 334 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 GOLGA8IPA6NC78 632 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 GOLGA8JA6NMD2 632 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 H3BQV1 296 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 HUS1O60921 280 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 SPINK2P20155 84 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 GARTP22102 1010 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 DGKEP52429 567 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 CACNA2D1P54289 1103 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 PSMC1P62191 440 aaKnown RBP14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 MYL7Q01449 175 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 ZNF252P-AS1Q0IIN9 211 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 POSTNQ15063 836 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 CRY1Q16526 586 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 SH3PXD2AQ5TCZ1 1133 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 C12orf40Q86WS4 652 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 PHTF2Q8N3S3 785 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 KRI1Q8N9T8 703 aaKnown RBP14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 KDF1Q8NAX2 398 aaPredicted RBP14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 GATA6Q92908 595 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 MYLPFQ96A32 169 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 SPATA17Q96L03 361 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 TBC1D7Q9P0N9 293 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 ITPR1Q14643 2758 aa14.78□□□□□ -0.04
CLPTM1-208ENST00000588274 LOC400499M0QZD8 3231 aa14.77□□□□□ -0.04
CLPTM1-208ENST00000588274 LAMA5O15230 3695 aa14.77□□□□□ -0.04
CLPTM1-208ENST00000588274 LEFTY2O00292 366 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 BMP15O95972 392 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 OAS1P00973 400 aaKnown RBP14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 CSRP1P21291 193 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms