RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 VPS13AQ96RL7 3174 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 SLC38A8A6NNN8 435 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 LRRN2O75325 713 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 FGFR1OPO95684 399 aaKnown RBP20.44■□□□□ 0.86
CIRBP-217ENST00000588230 GNA14O95837 355 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 HMGA1P17096 107 aaKnown RBP20.44■□□□□ 0.86
CIRBP-217ENST00000588230 TRIM21P19474 475 aaKnown RBP20.44■□□□□ 0.86
CIRBP-217ENST00000588230 ANXA13P27216 316 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 NDST1P52848 882 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 PTPN5P54829 565 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 GPR158Q5T848 1215 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 TANGO2Q6ICL3 276 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 ACOT1Q86TX2 421 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 UNC93AQ86WB7 457 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 STKLD1Q8NE28 680 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 FLCNQ8NFG4 579 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 ZSCAN18Q8TBC5 510 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-217ENST00000588230 SLC35C1Q96A29 364 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 SRRTQ9BXP5 876 aaKnown RBP20.44■□□□□ 0.86
CIRBP-217ENST00000588230 B3GNT5Q9BYG0 378 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 ELOVL4Q9GZR5 314 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 IL21Q9HBE4 155 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 ARHGEF3Q9NR81 526 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 RWDD2AQ9UIY3 292 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 NCANO14594 1321 aa20.44■□□□□ 0.86
CIRBP-217ENST00000588230 TRIM66O15016 1216 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 GALR2O43603 387 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-217ENST00000588230 CBWD6Q4V339 395 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 CBWD3Q5JTY5 395 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 CBWD5Q5RIA9 395 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 ELSPBP1Q96BH3 223 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 PHOX2BQ99453 314 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 MED10Q9BTT4 135 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 ZNF518BQ9C0D4 1074 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 DNAI2Q9GZS0 605 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 UXTQ9UBK9 157 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-217ENST00000588230 ATP8B3O60423 1300 aa20.43■□□□□ 0.86
CIRBP-217ENST00000588230 CLDN5O00501 218 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 NOL4O94818 638 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 CD58P19256 250 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 NLRP12P59046 1061 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 CYP4F8P98187 520 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 ORC1Q13415 861 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 STXBP5Q5T5C0 1151 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 CRYBG2Q8N1P7 616 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 TRMT2BQ96GJ1 504 aaKnown RBP20.42■□□□□ 0.86
CIRBP-217ENST00000588230 FAXDC2Q96IV6 333 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 SPATA17Q96L03 361 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 CEP295NLQ96MC4 621 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 TASP1Q9H6P5 420 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 TBC1D17Q9HA65 648 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 HMGXB4Q9UGU5 601 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 COQ4Q9Y3A0 265 aa20.42■□□□□ 0.86
CIRBP-217ENST00000588230 COL4A2P08572 1712 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 F8VP50 259 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 F11P03951 625 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 CCDC192P0DO97 292 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 VIPR2P41587 438 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 FMO5P49326 533 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 INCA1Q0VD86 236 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 PHLDB3Q6NSJ2 640 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 TTC39CQ8N584 583 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 MRPS31Q92665 395 aaKnown RBP20.41■□□□□ 0.86
CIRBP-217ENST00000588230 E2F7Q96AV8 911 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 C8orf48Q96LL4 319 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 MYRFLQ96LU7 910 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 DDX23Q9BUQ8 820 aaKnown RBP20.41■□□□□ 0.86
CIRBP-217ENST00000588230 NT5C1AQ9BXI3 368 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 TRPV4Q9HBA0 871 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 ZMYM5Q9UJ78 669 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 PTPRDP23468 1912 aa20.41■□□□□ 0.86
CIRBP-217ENST00000588230 CETN1Q12798 172 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 DENND5BQ6ZUT9 1274 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 TMEM150AQ86TG1 271 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 FAM35AQ86V20 835 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 GPIHBP1Q8IV16 184 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 ARID3BQ8IVW6 561 aaPredicted RBP20.4■□□□□ 0.86
CIRBP-217ENST00000588230 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 TATDN2Q93075 761 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 EHD2Q9NZN4 543 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 DLGAP2Q9P1A6 1054 aa20.4■□□□□ 0.86
CIRBP-217ENST00000588230 SHISA7A6NL88 538 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 DPYSL4O14531 572 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 CILPO75339 1184 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 CCDC130P13994 396 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 DDX6P26196 483 aaKnown RBP eCLIP20.39■□□□□ 0.856e-15■■□□□ 11.4
CIRBP-217ENST00000588230 STARD6P59095 220 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 PFKPQ01813 784 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 GRM2Q14416 872 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 TPD52L1Q16890 204 aaPredicted RBP20.39■□□□□ 0.85
CIRBP-217ENST00000588230 CREBRFQ8IUR6 639 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 TRIM59Q8IWR1 403 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 CCDC105Q8IYK2 499 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 RSPRY1Q96DX4 576 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 SMARCD1Q96GM5 515 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 TWNKQ96RR1 684 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 TRMT61BQ9BVS5 477 aaKnown RBP20.39■□□□□ 0.85
CIRBP-217ENST00000588230 SLC46A2Q9BY10 475 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 FAM49BQ9NUQ9 324 aa20.39■□□□□ 0.85
CIRBP-217ENST00000588230 DACH1Q9UI36 760 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms