RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 TRIB1Q96RU8 372 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 RBM15Q96T37 977 aaKnown RBP eCLIP6.31□□□□□ -1.4
TUBD1-208ENST00000588009 RTKNQ9BST9 563 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 PLA2G12BQ9BX93 195 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SLC26A6Q9BXS9 759 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SLC46A2Q9BY10 475 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 UNC45AQ9H3U1 944 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 CD320Q9NPF0 282 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 PRDM8Q9NQV8 689 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 VSX1Q9NZR4 365 aaPredicted RBP6.31□□□□□ -1.4
TUBD1-208ENST00000588009 LPAR3Q9UBY5 353 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 FEM1BQ9UK73 627 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 TMEM98Q9Y2Y6 226 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 RAD54BQ9Y620 910 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 PCDH17O14917 1159 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 NOBOXO60393 691 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
TUBD1-208ENST00000588009 MBD4O95243 580 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 RASAL1O95294 804 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 INHBBP09529 407 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 C1QTNF9P0C862 333 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 SRGAP2BP0DMP2 458 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 SLC5A2P31639 672 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 RPS19P39019 145 aaKnown RBP6.3□□□□□ -1.4
TUBD1-208ENST00000588009 GCLCP48506 637 aaPredicted RBP6.3□□□□□ -1.4
TUBD1-208ENST00000588009 PAPOLAP51003 745 aaKnown RBP6.3□□□□□ -1.4
TUBD1-208ENST00000588009 DGKEP52429 567 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 ZNF134P52741 427 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 PPP2CBP62714 309 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 PPP2CAP67775 309 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 CUL4BQ13620 913 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 LAYNQ6UX15 382 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 ARHGEF18Q6ZSZ5 1173 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 C2CD5Q86YS7 1000 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 SYT12Q8IV01 421 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 RASGRP3Q8IV61 690 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 CPOQ8IVL8 374 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
TUBD1-208ENST00000588009 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 POC1BQ8TC44 478 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 HERVK_113Q902F9 699 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 PPP2R3CQ969Q6 453 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 MAELQ96JY0 434 aaKnown RBP6.3□□□□□ -1.4
TUBD1-208ENST00000588009 FAM227BQ96M60 508 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 LRRC37BQ96QE4 947 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 PNKPQ96T60 521 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 EPS8L2Q9H6S3 715 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 SH3BP1Q9Y3L3 701 aa6.3□□□□□ -1.4
TUBD1-208ENST00000588009 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 OR2W5A6NFC9 320 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 HOXC11O43248 304 aaPredicted RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 RGS10O43665 173 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 XBP1P17861 261 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 KCNA3P22001 575 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 RXRGP48443 463 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 PXNP49023 591 aaPredicted RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 BCAT1P54687 386 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 ALDH18A1P54886 795 aaKnown RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 LOXL3P58215 753 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 SCAPQ12770 1279 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 ELAVL1Q15717 326 aaKnown RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 PTCHD3Q3KNS1 767 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 ZNF648Q5T619 568 aaPredicted RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 ATPAF1Q5TC12 328 aaPredicted RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 METRNLQ641Q3 311 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 TAX1BP1Q86VP1 789 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 TMEM151BQ8IW70 566 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 AFG1LQ8WV93 481 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 THAP4Q8WY91 577 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 MPHOSPH9Q99550 1183 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 REXO4Q9GZR2 422 aaKnown RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 TAF1DQ9H5J8 278 aaPredicted RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 SEPSECSQ9HD40 501 aaKnown RBP6.29□□□□□ -1.4
TUBD1-208ENST00000588009 UBN1Q9NPG3 1134 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 PLA2G3Q9NZ20 509 aa6.29□□□□□ -1.4
TUBD1-208ENST00000588009 CCDC195A0A1B0GUA6 201 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 CCNT2O60583 730 aaKnown RBP6.28□□□□□ -1.4
TUBD1-208ENST00000588009 SNX2O60749 519 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 SOAT2O75908 522 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 CD4P01730 458 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 LDHCP07864 332 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 ANXA6P08133 673 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 SPATA31D3P0C874 917 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 ARP10275 920 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 HK1P19367 917 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 ELF1P32519 619 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 TUBP50607 506 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 PRKAA2P54646 552 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 LINC00310P59036 64 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms