RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 FKBP15Q5T1M5 1219 aa22.78■■□□□ 1.24
RETREG3-204ENST00000586796 OTOP3Q7RTS5 596 aa22.78■■□□□ 1.24
RETREG3-204ENST00000586796 UBR7Q8N806 425 aa22.78■■□□□ 1.24
RETREG3-204ENST00000586796 TDRD5Q8NAT2 981 aaKnown RBP22.78■■□□□ 1.24
RETREG3-204ENST00000586796 ACSF2Q96CM8 615 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-204ENST00000586796 MYADMQ96S97 322 aa22.78■■□□□ 1.24
RETREG3-204ENST00000586796 LSM14BQ9BX40 385 aaKnown RBP22.78■■□□□ 1.24
RETREG3-204ENST00000586796 FAM124BQ9H5Z6 455 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-204ENST00000586796 ZNF334Q9HCZ1 680 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-204ENST00000586796 KRT82Q9NSB4 513 aa22.78■■□□□ 1.24
RETREG3-204ENST00000586796 APEX2Q9UBZ4 518 aa22.78■■□□□ 1.24
RETREG3-204ENST00000586796 TRIM66O15016 1216 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 AP1G2O75843 785 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 KRT5P13647 590 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 CD19P15391 556 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 CCR2P41597 374 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 MFAP3P55082 362 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 PPP1R26Q5T8A7 1209 aaPredicted RBP22.77■■□□□ 1.24
RETREG3-204ENST00000586796 GJD3Q8N144 294 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 SMARCD1Q96GM5 515 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 KCNK16Q96T55 309 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 SIX2Q9NPC8 291 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 TMEM30AQ9NV96 361 aa22.77■■□□□ 1.24
RETREG3-204ENST00000586796 LOC730098B7Z3J9 87 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 NRG2O14511 850 aaPredicted RBP22.76■■□□□ 1.23
RETREG3-204ENST00000586796 ZNF197O14709 1029 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 CALCAP01258 141 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 CSH1P0DML2 217 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 CSH2P0DML3 217 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 CEBPBP17676 345 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 TPM4P67936 248 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 PRSS36Q5K4E3 855 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 TMC8Q8IU68 726 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 RBBP8NLQ8NC74 664 aaPredicted RBP22.76■■□□□ 1.23
RETREG3-204ENST00000586796 ST13P5Q8NFI4 369 aaPredicted RBP22.76■■□□□ 1.23
RETREG3-204ENST00000586796 HNRNPABQ99729 332 aaKnown RBP22.76■■□□□ 1.23
RETREG3-204ENST00000586796 LRRC3Q9BY71 257 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 TSPY26PQ9H489 355 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 CD320Q9NPF0 282 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 DNAJC12Q9UKB3 198 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 USTQ9Y2C2 406 aa22.76■■□□□ 1.23
RETREG3-204ENST00000586796 A0A1W2PRU2 124 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 C19orf67A6NJJ6 358 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 RNF225M0QZC1 329 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-204ENST00000586796 BEST1O76090 585 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 CAVIN2O95810 425 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 GABRR2P28476 465 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 USP8P40818 1118 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 KLK7P49862 253 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 MAP3K7CLP57077 242 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 UBXN1Q04323 297 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 IFRD2Q12894 506 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-204ENST00000586796 LRSAM1Q6UWE0 723 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 LEMD2Q8NC56 503 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 FGF13Q92913 245 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 JAKMIP2Q96AA8 810 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 MCRS1Q96EZ8 462 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 C8orf48Q96LL4 319 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 PCMTD1Q96MG8 357 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-204ENST00000586796 ATXN3LQ9H3M9 355 aa22.75■■□□□ 1.23
RETREG3-204ENST00000586796 AVENQ9NQS1 362 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-204ENST00000586796 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.75■■□□□ 1.23
RETREG3-204ENST00000586796 AJAP1Q9UKB5 411 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-204ENST00000586796 LGALS16A8MUM7 142 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 GOLGA6L19H0YKK7 550 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 FAM200BP0CF97 657 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 HMGA1P17096 107 aaKnown RBP22.74■■□□□ 1.23
RETREG3-204ENST00000586796 EPHA5P54756 1037 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 TEAD2Q15562 447 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 SGO2Q562F6 1265 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 DENND5BQ6ZUT9 1274 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 ENOSF1Q7L5Y1 443 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 APTXQ7Z2E3 356 aaKnown RBP22.74■■□□□ 1.23
RETREG3-204ENST00000586796 SHKBP1Q8TBC3 707 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 SPATA17Q96L03 361 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 FAM81BQ96LP2 452 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 SMOQ99835 787 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 COL25A1Q9BXS0 654 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-204ENST00000586796 DMAP1Q9NPF5 467 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-204ENST00000586796 LIMD1Q9UGP4 676 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 CDH7Q9ULB5 785 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 C5orf42Q9H799 3197 aa22.74■■□□□ 1.23
RETREG3-204ENST00000586796 DENND4AQ7Z401 1863 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 LRRC10BA6NIK2 292 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 MOSPD3O75425 235 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 NOL4O94818 638 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 KLHDC7AQ5VTJ3 777 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 GAREM2Q75VX8 874 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 NPAS3Q8IXF0 933 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 PLCD3Q8N3E9 789 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 GCNAQ96QF7 691 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 DOCK6Q96HP0 2047 aa22.73■■□□□ 1.23
RETREG3-204ENST00000586796 SERPINC1P01008 464 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 PAEPP09466 180 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 VDRP11473 427 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 LAMP2P13473 410 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 USP46P62068 366 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 CYP4F8P98187 520 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 RAPGEF1Q13905 1077 aa22.72■■□□□ 1.23
RETREG3-204ENST00000586796 SYCP1Q15431 976 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms