RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 WHAMMQ8TF30 809 aa18.89■□□□□ 0.62
RBFOX1-222ENST00000585867 FAM161BQ96MY7 647 aa18.89■□□□□ 0.62
RBFOX1-222ENST00000585867 TUBB2BQ9BVA1 445 aa18.89■□□□□ 0.62
RBFOX1-222ENST00000585867 ELOVL4Q9GZR5 314 aa18.89■□□□□ 0.62
RBFOX1-222ENST00000585867 ABCB4P21439 1286 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 BRD2P25440 801 aaKnown RBP18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 LMO2P25791 158 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 NOMO3P69849 1222 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 PTPROQ16827 1216 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 SGO2Q562F6 1265 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 TMEM35BQ8NCS4 154 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 VCPIP1Q96JH7 1222 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 RTP3Q9BQQ7 232 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 THAP2Q9H0W7 228 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 MTRRQ9UBK8 725 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 GTF3C4Q9UKN8 822 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 PCDHGC5Q9Y5F6 944 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 BACE2Q9Y5Z0 518 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 IRAK3Q9Y616 596 aa18.89■□□□□ 0.61
RBFOX1-222ENST00000585867 TSC2P49815 1807 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 C2orf71A6NGG8 1288 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 A8MXQ7 604 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 HCRTO43612 131 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 TBC1D4O60343 1298 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 PDGFRBP09619 1106 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 RPL17P18621 184 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 NAA35Q5VZE5 725 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 GPR153Q6NV75 609 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 PHF13Q86YI8 300 aaPredicted RBP18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 SYCE1Q8N0S2 351 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 MSANTD4Q8NCY6 345 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 MRPL38Q96DV4 380 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 CYFIP2Q96F07 1278 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 HEXIM2Q96MH2 286 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 LHX5Q9H2C1 402 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 STXBP5LQ9Y2K9 1186 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 JRKLQ9Y4A0 524 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 CAPN6Q9Y6Q1 641 aa18.88■□□□□ 0.61
RBFOX1-222ENST00000585867 COL4A4P53420 1690 aaPredicted RBP18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 HIDE1A8MVS5 230 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 BUB1O43683 1085 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 CALCAP01258 141 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 ACAT1P24752 427 aaKnown RBP18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 CDH5P33151 784 aaPredicted RBP18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 HADHBP55084 474 aaKnown RBP18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 LIN9Q5TKA1 542 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 RSPO2Q6UXX9 243 aaPredicted RBP18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 ZNF653Q96CK0 615 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 TWNKQ96RR1 684 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 CLSTN3Q9BQT9 956 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 ACBD6Q9BR61 282 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 OXCT2Q9BYC2 517 aaPredicted RBP18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 FNIP2Q9P278 1114 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 UVRAGQ9P2Y5 699 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 HMGXB4Q9UGU5 601 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 SALL4Q9UJQ4 1053 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 CDY1Q9Y6F8 540 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 CHD9Q3L8U1 2897 aa18.87■□□□□ 0.61
RBFOX1-222ENST00000585867 OR6C75A6NL08 312 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 CYP1A2P05177 515 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 CNPP09543 421 aaKnown RBP18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 PCSK1P29120 753 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 ARPP19P56211 112 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 CREMQ03060 361 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 C1QBPQ07021 282 aaKnown RBP18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 CNGA2Q16280 664 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 MCOLN2Q8IZK6 566 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 OR10T2Q8NGX3 314 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 SLC35G2Q8TBE7 412 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 UBE2Q2Q8WVN8 375 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 TFAP2BQ92481 460 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 TNIP3Q96KP6 325 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 KLHL5Q96PQ7 755 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 TMEM209Q96SK2 561 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 EMILIN2Q9BXX0 1053 aa18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 AVENQ9NQS1 362 aaPredicted RBP18.86■□□□□ 0.61
RBFOX1-222ENST00000585867 TEX28O15482 410 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 ADAM12O43184 909 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 URI1O94763 535 aaPredicted RBP18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 OR4Q2P0C623 313 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 OR1D2P34982 312 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 PASD1Q8IV76 773 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 CPA5Q8WXQ8 436 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 DPEP3Q9H4B8 488 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 LMCD1Q9NZU5 365 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 CTTNBP2NLQ9P2B4 639 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 CDH9Q9ULB4 789 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 ATP2C2O75185 946 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 MTA2O94776 668 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 CALB1P05937 261 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 NDUFV1P49821 464 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 TSPY1Q01534 308 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 ORC1Q13415 861 aa18.85■□□□□ 0.61
RBFOX1-222ENST00000585867 INTS6LQ5JSJ4 861 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms