RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ZBTB16Q05516 673 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 CACNB2Q08289 660 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 PHF13Q86YI8 300 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 LPPQ93052 612 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 MRPL45Q9BRJ2 306 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 SIK2Q9H0K1 926 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 UBQLN1Q9UMX0 589 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 CHMP2BQ9UQN3 213 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 MYO1CO00159 1063 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 HCRTO43612 131 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 BANF1O75531 89 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 APRTP07741 180 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 IQCF3P0C7M6 154 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 FBXO47Q5MNV8 452 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 NPNTQ6UXI9 565 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 C3orf20Q8ND61 904 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 PRMT1Q99873 361 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 B4GALT4O60513 344 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 TSPAN1O60635 241 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 PHBP35232 272 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 TAF6P49848 677 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 TAF5Q15542 800 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ARHGEF18Q6ZSZ5 1173 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 VCPIP1Q96JH7 1222 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 SMC6Q96SB8 1091 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 PSD3Q9NYI0 1048 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 TMEM191CA6NGB0 347 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 CYP1A1P04798 512 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 INHBAP08476 426 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 GHRP10912 638 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 MSH2P43246 934 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ARL4CP56559 192 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 CCNG2Q16589 344 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 HIF1AQ16665 826 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 DCAF4L1Q3SXM0 396 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 CEP128Q6ZU80 1094 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 GAD1Q99259 594 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 MYH9P35579 1960 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 SOCS7O14512 581 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 FSCN2O14926 492 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 LGR5O75473 907 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 POMCP01189 267 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 PIGRP01833 764 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ERBB2P04626 1255 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 RARGP13631 454 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 RABGGTBP53611 331 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 RAD23BP54727 409 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 KYAT1Q16773 422 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ZNF572Q7Z3I7 529 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ADAM32Q8TC27 787 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 NDRG1Q92597 394 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM193BQ96PV7 902 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
SMARCA4-208ENST00000585799 IGKV6D-21A0A0A0MT36 114 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 B3GAT3O94766 335 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SAT1P21673 171 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM133BQ5BKY9 247 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 PLEKHA7Q6IQ23 1121 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 CEP41Q9BYV8 373 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■■□ 25.1
SMARCA4-208ENST00000585799 LTBP1Q14766 1721 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 CYB561D2O14569 222 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 CD48P09326 243 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SULT1E1P49888 294 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SH3PXD2AQ5TCZ1 1133 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 PPM1NQ8N819 430 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 ZNF473Q8WTR7 871 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 TNIP3Q96KP6 325 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SYT11Q9BT88 431 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 IFT122Q9HBG6 1241 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM53CQ9NYF3 392 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 TMEM59LQ9UK28 342 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 ITGA11Q9UKX5 1188 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 CCDC78A2IDD5 438 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 RIPK2O43353 540 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM183BPQ6ZVS7 135 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 AGAP3Q96P47 875 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SDCBP2Q9H190 292 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 CYP3A43Q9HB55 503 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 PCYOX1Q9UHG3 505 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms