RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 RNF8O76064 485 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MMP3P08254 477 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PECAM1P16284 738 aaPredicted RBP17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PCK1P35558 622 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MYO1EQ12965 1108 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DUSP28Q4G0W2 176 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KCNT1Q5JUK3 1230 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 LCLAT1Q6UWP7 414 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ACTL9Q8TC94 416 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 P3H4Q92791 437 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PHACTR1Q9C0D0 580 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MIS12Q9H081 205 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NAALADL1Q9UQQ1 740 aa17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TRUB2O95900 331 aaKnown RBP17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CREB1P16220 341 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SMPD1P17405 629 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MIPP30301 263 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GTF2A2P52657 109 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ZNF143P52747 638 aaPredicted RBP17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NDST1P52848 882 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PLCB3Q01970 1234 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GRB14Q14449 540 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 STILQ15468 1287 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DCAF4L1Q3SXM0 396 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RNF187Q5TA31 235 aaPredicted RBP17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 LRRC34Q8IZ02 419 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CYP4X1Q8N118 509 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PLEKHA5Q9HAU0 1116 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ASNSD1Q9NWL6 643 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DERAQ9Y315 318 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ZNF236Q9UL36 1845 aa17.32■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ALOX15BO15296 676 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TTC31Q49AM3 519 aaPredicted RBP17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CHADLQ6NUI6 762 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CCDC121Q6ZUS5 278 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TDRPQ86YL5 185 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PRCCQ92733 491 aaPredicted RBP17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KIF12Q96FN5 646 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MAML3Q96JK9 1138 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NT5C1AQ9BXI3 368 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 OSBPL7Q9BZF2 842 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NSRP1Q9H0G5 558 aaKnown RBP17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 USP18Q9UMW8 372 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CCL15-CCL14A0A0B4J2E2 113 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GLTPD2A6NH11 291 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 APOC4-APOC2K7ER74 178 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ENDOD1O94919 500 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 APOC2P02655 101 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CD48P09326 243 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 BRAFP15056 766 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CYP3A5P20815 502 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GPD1P21695 349 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DYNLT1P63172 113 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ITIH4Q14624 930 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CCL15Q16663 113 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DGKDQ16760 1214 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 FAM102AQ5T9C2 384 aaPredicted RBP17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CENPUQ71F23 418 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GPR142Q7Z601 462 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PACS2Q86VP3 889 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CCDC197Q8NCU1 140 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 UBA3Q8TBC4 463 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ACTR5Q9H9F9 607 aaPredicted RBP17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PCSK1NQ9UHG2 260 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TSPAN16Q9UKR8 245 aa17.31■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 C2CD4BA6NLJ0 364 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 IFNB1P01574 187 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GCAP28676 217 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GDF10P55107 478 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NR1H3Q13133 447 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 APBB1IPQ7Z5R6 666 aaPredicted RBP17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DPP9Q86TI2 863 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ANKS4BQ8N8V4 417 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KCTD6Q8NC69 237 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 OR6J1Q8NGC5 347 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 BRI3BPQ8WY22 251 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MAML1Q92585 1016 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CNPY3Q9BT09 278 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RSAD1Q9HA92 442 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PPCSQ9HAB8 311 aa17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SAE1Q9UBE0 346 aaPredicted RBP17.3■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 IQCA1LA6NCM1 817 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RRN3P2A6NIE6 340 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PFKMP08237 780 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 IFNAR2P48551 515 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ACVR2BQ13705 512 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 LACTB2Q53H82 288 aaPredicted RBP17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 IQSEC1Q6DN90 963 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DYDC1Q8WWB3 177 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PEBP4Q96S96 227 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ADAMTS10Q9H324 1103 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KDM4CQ9H3R0 1056 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms