RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 MAVSQ7Z434 540 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 FANCBQ8NB91 859 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 DDX17Q92841 729 aaKnown RBP3.73□□□□□ -1.81
VAPA-208ENST00000584796 QTRT1Q9BXR0 403 aaKnown RBP3.73□□□□□ -1.81
VAPA-208ENST00000584796 WDCPQ9H6R7 721 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 SLAMF7Q9NQ25 335 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 USP35Q9P2H5 1018 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 TBC1D30Q9Y2I9 924 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 ATP10AO60312 1499 aa3.73□□□□□ -1.81
VAPA-208ENST00000584796 CEP170BQ9Y4F5 1589 aaPredicted RBP3.72□□□□□ -1.81
VAPA-208ENST00000584796 C9orf84Q5VXU9 1444 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 PRRT4C9JH25 899 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 SLC16A6O15403 523 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 TLR5O60602 858 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 ZRANB2O95218 330 aaKnown RBP eCLIP3.72□□□□□ -1.813e-6■□□□□ 11.2
VAPA-208ENST00000584796 ONECUT2O95948 504 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 IL6RP08887 468 aaPredicted RBP3.72□□□□□ -1.81
VAPA-208ENST00000584796 LIPAP38571 399 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 PHKA1P46020 1223 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 ZNF134P52741 427 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 EEFSECP57772 596 aaKnown RBP3.72□□□□□ -1.81
VAPA-208ENST00000584796 NOGQ13253 232 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 ODF1Q14990 250 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 SFRP4Q6FHJ7 346 aaPredicted RBP3.72□□□□□ -1.81
VAPA-208ENST00000584796 TMEM108Q6UXF1 575 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 USP37Q86T82 979 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 DENND1AQ8TEH3 1009 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 SH2D3AQ9BRG2 576 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 SLC13A1Q9BZW2 595 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 CCDC8Q9H0W5 538 aaPredicted RBP3.72□□□□□ -1.81
VAPA-208ENST00000584796 MRPL46Q9H2W6 279 aaKnown RBP3.72□□□□□ -1.81
VAPA-208ENST00000584796 PCDHA3Q9Y5H8 950 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 CDC42BPAQ5VT25 1732 aa3.72□□□□□ -1.81
VAPA-208ENST00000584796 DNMT1P26358 1616 aaKnown RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 SMIM22K7EJ46 135 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 M0QYG6 137 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 QSOX1O00391 747 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 TRIM38O00635 465 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 PPEF2O14830 753 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 SLC16A3O15427 465 aaKnown RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 GNAI2P04899 355 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 CYP2D6P10635 497 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 PIM1P11309 404 aaPredicted RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 CYP2C18P33260 490 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 CLCN2P51788 898 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 GUCY2FP51841 1108 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 HK3P52790 923 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 THEMIS2Q5TEJ8 643 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 FAM160B1Q5W0V3 765 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 ICE2Q659A1 982 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 HEATR3Q7Z4Q2 680 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 TNPO1Q92973 898 aaKnown RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 FSD1LQ9BXM9 530 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 PRSS22Q9GZN4 317 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 DUSP22Q9NRW4 184 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 CFAP65Q6ZU64 1925 aaKnown RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 GOLGA3Q08378 1498 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 TCOF1Q13428 1488 aaKnown RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 REREQ9P2R6 1566 aa3.71□□□□□ -1.82
VAPA-208ENST00000584796 ZC3H13Q5T200 1668 aaKnown RBP3.71□□□□□ -1.82
VAPA-208ENST00000584796 SCAPERQ9BY12 1400 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 DCLK1O15075 740 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 DNAJB5O75953 348 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 HOXB6P17509 224 aaKnown RBP3.7□□□□□ -1.82
VAPA-208ENST00000584796 PPIFP30405 207 aaKnown RBP3.7□□□□□ -1.82
VAPA-208ENST00000584796 CYP4F2P78329 520 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 ITKQ08881 620 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 PCID2Q5JVF3 399 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 TREML2Q5T2D2 321 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 SLC2A7Q6PXP3 512 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 CATSPERGQ6ZRH7 1159 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 TECPR1Q7Z6L1 1165 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 PNMA8AQ86V59 439 aaPredicted RBP3.7□□□□□ -1.82
VAPA-208ENST00000584796 PPP1R3BQ86XI6 285 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 GALNT16Q8N428 558 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 PRR18Q8N4B5 295 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.7□□□□□ -1.82
VAPA-208ENST00000584796 RGMAQ96B86 450 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 MTMR8Q96EF0 704 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 SPC25Q9HBM1 224 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 HESX1Q9UBX0 185 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 ABCF2Q9UG63 623 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 FEZ2Q9UHY8 353 aaPredicted RBP3.7□□□□□ -1.82
VAPA-208ENST00000584796 SSX2IPQ9Y2D8 614 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 MAGI2Q86UL8 1455 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 PREX2Q70Z35 1606 aa3.7□□□□□ -1.82
VAPA-208ENST00000584796 ADGBQ8N7X0 1667 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 PRXQ9BXM0 1461 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 CYP2D7A0A087X1C5 515 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 SMIM35A0A1B0GVV1 85 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 KATNA1O75449 491 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 TJP3O95049 919 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 NTN1O95631 604 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 ATXN1LP0C7T5 689 aaKnown RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 TYRP14679 529 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 CDK11BP21127 795 aaKnown RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 CDKN1CP49918 316 aaPredicted RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 CCT4P50991 539 aaKnown RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 FOXG1P55316 489 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms