RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	PFKP	Q01813	784 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	ADAM9	Q13443	819 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	MAPRE1	Q15691	268 aa	Known RBP	14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	SDHAF4	Q5VUM1	108 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	VIT	Q6UXI7	678 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	C4orf50	Q6ZRC1	276 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	TMEM150A	Q86TG1	271 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	ZC3H3	Q8IXZ2	948 aa	Known RBP	14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	ZBTB44	Q8NCP5	570 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	ELMO3	Q96BJ8	720 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	RSPRY1	Q96DX4	576 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	PCED1B	Q96HM7	432 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	SDCBP2	Q9H190	292 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	SNX25	Q9H3E2	840 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	ATXN3L	Q9H3M9	355 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	DPEP3	Q9H4B8	488 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	SLITRK6	Q9H5Y7	841 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	ZSCAN32	Q9NX65	697 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	CHMP5	Q9NZZ3	219 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	MAN1B1	Q9UKM7	699 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	USP18	Q9UMW8	372 aa		14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	SMG5	Q9UPR3	1016 aa	Known RBP	14.21	□□□□□ -0.13
SREBF1-223	ENST00000584760	CEP250	Q9BV73	2442 aa		14.21	□□□□□ -0.14
SREBF1-223	ENST00000584760	DNAH14	Q0VDD8	3507 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	DCDC2B	A2VCK2	349 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	TADA3	O75528	432 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	HLA-DRA	P01903	254 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	KRT13	P13646	458 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	CDC25C	P30307	473 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	GNL1	P36915	607 aa	Predicted RBP	14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	VIPR2	P41587	438 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	PIK3CA	P42336	1068 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	RAP1GAP	P47736	663 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	PMS1	P54277	932 aa	Known RBP	14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	NLRP12	P59046	1061 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	RPL10A	P62906	217 aa	Known RBP	14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	CYP4F8	P98187	520 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	PPP3CA	Q08209	521 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	GRM2	Q14416	872 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	DDR2	Q16832	855 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	ZNF667	Q5HYK9	610 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	VSTM1	Q6UX27	236 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	TPRG1	Q6ZUI0	275 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	OR6B3	Q8NGW1	331 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	MYCBPAP	Q8TBZ2	947 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	DEPDC1B	Q8WUY9	529 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	TAF4B	Q92750	862 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	EEF2KMT	Q96G04	330 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	TRMT2B	Q96GJ1	504 aa	Known RBP	14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	MYRFL	Q96LU7	910 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	GCNA	Q96QF7	691 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	GTPBP4	Q9BZE4	634 aa	Known RBP	14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	CDV3	Q9UKY7	258 aa	Known RBP	14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	CACNA1I	Q9P0X4	2223 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	GPR179	Q6PRD1	2367 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	MYO16	Q9Y6X6	1858 aa		14.2	□□□□□ -0.14
SREBF1-223	ENST00000584760	HEPACAM2	A8MVW5	462 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	PRR5-ARHGAP8	B1AHC4	643 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	NCAM2	O15394	837 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	PRAMEF12	O95522	483 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	F11	P03951	625 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	CSH1	P0DML2	217 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	CSH2	P0DML3	217 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	PSMC3	P17980	439 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	BMP6	P22004	513 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	BDNF	P23560	247 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	TARS	P26639	723 aa	Known RBP	14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	WEE1	P30291	646 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	ANP32A	P39687	249 aa	Known RBP	14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	MAGEA9	P43362	315 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	ASPA	P45381	313 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	GCLM	P48507	274 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	CDH8	P55286	799 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	ARHGAP8	P85298	464 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	CYP27A1	Q02318	531 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	LMNB2	Q03252	620 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	TAF12	Q16514	161 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	SGSM1	Q2NKQ1	1148 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	ARHGAP15	Q53QZ3	475 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	MDH1B	Q5I0G3	518 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	GPR158	Q5T848	1215 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	SCARA5	Q6ZMJ2	495 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	ARID3B	Q8IVW6	561 aa	Predicted RBP	14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	B3GALNT2	Q8NCR0	500 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	TAS1R2	Q8TE23	839 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	DNASE1L2	Q92874	299 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	CLDN23	Q96B33	292 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	NELL2	Q99435	816 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	EPC1	Q9H2F5	836 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	TASP1	Q9H6P5	420 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	MAGEC2	Q9UBF1	373 aa	Predicted RBP	14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	FRYL	O94915	3013 aa		14.19	□□□□□ -0.14
SREBF1-223	ENST00000584760	TRIM49B	A6NDI0	452 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760	SLC38A8	A6NNN8	435 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760		A8MXQ7	604 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760	ARNTL	O00327	626 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760	CETN3	O15182	167 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760	LILRB5	O75023	590 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760	CLSTN1	O94985	981 aa		14.18	□□□□□ -0.14
SREBF1-223	ENST00000584760	EPB41	P11171	864 aa	Known RBP	14.18	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms