RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 C17orf75Q9HAS0 396 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 METTL5Q9NRN9 209 aaKnown RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 ASB14A6NK59 587 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 TRIM24O15164 1050 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 TNFAIP8O95379 198 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 GLI1P08151 1106 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 TGM2P21980 687 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 PTPN7P35236 360 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 EMC2Q15006 297 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 ADGRA2Q96PE1 1338 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 BTBD10Q9BSF8 475 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.53□□□□□ -0.24
RNF43-208ENST00000584437 E2F8A0AVK6 867 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 SPP2Q13103 211 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 SPDYCQ5MJ68 293 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 IPMKQ8NFU5 416 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 MAGED4Q96JG8 741 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 BTBD7Q9P203 1132 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 COPG2Q9UBF2 871 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 ITGB1BP2Q9UKP3 347 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 V9GYQ6 96 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
RNF43-208ENST00000584437 VEPH1Q14D04 833 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 CACHD1Q5VU97 1274 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 PTRHD1Q6GMV3 140 aaKnown RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 PABPC5Q96DU9 382 aaKnown RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 ZNF668Q96K58 619 aaPredicted RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 RPS6KL1Q9Y6S9 549 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 BCORL1Q5H9F3 1711 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 SOX11P35716 441 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 RAD23AP54725 363 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 WASHC5Q12768 1159 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 MMRN1Q13201 1228 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 GTF2H3Q13889 308 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 PDK2Q15119 407 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 FASTKD5Q7L8L6 764 aaKnown RBP13.52□□□□□ -0.24
RNF43-208ENST00000584437 PACS2Q86VP3 889 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 TMEM143Q96AN5 459 aa13.52□□□□□ -0.24
RNF43-208ENST00000584437 NPHP4O75161 1426 aaPredicted RBP13.52□□□□□ -0.24
RNF43-208ENST00000584437 ADRA2BP18089 450 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 TRIP4Q15650 581 aaPredicted RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 C11orf63Q6NUN7 778 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 EXD1Q8NHP7 514 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 TET3O43151 1660 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 RHOBTB1O94844 696 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 UGT3A1Q6NUS8 523 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 SNX31Q8N9S9 440 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 ATG4AQ8WYN0 398 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 TRIM63Q969Q1 353 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 UBE2OQ9C0C9 1292 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.251e-8■□□□□ 9.5
RNF43-208ENST00000584437 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 FOXN3O00409 490 aaPredicted RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 MAFGO15525 162 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 TRAPPC3O43617 180 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 PGK2P07205 417 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 FAM200BP0CF97 657 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 CPB1P15086 417 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 SARSP49591 514 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 CUL2Q13617 745 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 LAMC2Q13753 1193 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 YTHDF3Q7Z739 585 aaKnown RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 EPB41L4AQ9HCS5 686 aaPredicted RBP13.52□□□□□ -0.25
RNF43-208ENST00000584437 SAR1AQ9NR31 198 aa13.52□□□□□ -0.25
RNF43-208ENST00000584437 FLT1P17948 1338 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 BCL10O95999 233 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 MTM1Q13496 603 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 MAPRE1Q15691 268 aaKnown RBP13.51□□□□□ -0.25
RNF43-208ENST00000584437 PDPK2PQ6A1A2 396 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 RDM1Q8NG50 284 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 STK32AQ8WU08 396 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 C19orf60Q96EN9 201 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 MMP19Q99542 508 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 KBTBD4Q9NVX7 518 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 SUPT7LO94864 414 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 GRIK1P39086 918 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 GEMP55040 296 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 TBL3Q12788 808 aaKnown RBP13.51□□□□□ -0.25
RNF43-208ENST00000584437 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 EIF1ADQ8N9N8 165 aaKnown RBP13.51□□□□□ -0.25
RNF43-208ENST00000584437 LPAR1Q92633 364 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 ZNF518BQ9C0D4 1074 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
RNF43-208ENST00000584437 CRB1P82279 1406 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms