RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	CKAP2	Q8WWK9	683 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CLMN	Q96JQ2	1002 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SGIP1	Q9BQI5	828 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	EURL	Q9NYK6	297 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NKIRAS1	Q9NYS0	192 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SIX4	Q9UIU6	781 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TNFSF13B	Q9Y275	285 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ACTL7B	Q9Y614	415 aa		13.89	□□□□□ -0.19
CSNK1D-222	ENST00000584377	LRRC37A2	A6NM11	1700 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RASA4B	C9J798	803 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RASA4	O43374	803 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	HBP1	O60381	514 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	LRCH4	O75427	683 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RTN3	O95197	1032 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NFIC	P08651	508 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KRT7	P08729	469 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TXN	P10599	105 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ALAD	P13716	330 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	STX2	P32856	288 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SLC25A11	Q02978	314 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ORC1	Q13415	861 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FASTKD3	Q14CZ7	662 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377		Q3C1V9	767 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KCNT1	Q5JUK3	1230 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TMEM63B	Q5T3F8	832 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CCDC62	Q6P9F0	684 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TRPM8	Q7Z2W7	1104 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	C1orf127	Q8N9H9	656 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MMP19	Q99542	508 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PCDH9	Q9HC56	1237 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	C3orf70	A6NLC5	250 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IQCF3	P0C7M6	154 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ABL2	P42684	1182 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PSMC4	P43686	418 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PAPOLA	P51003	745 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RAD23B	P54727	409 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	HADH	Q16836	314 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TBC1D25	Q3MII6	688 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ERO1B	Q86YB8	467 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ARFGAP1	Q8N6T3	406 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SLC35B2	Q8TB61	432 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CPXM1	Q96SM3	734 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	BCO2	Q9BYV7	579 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SAE1	Q9UBE0	346 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RBPJL	Q9UBG7	517 aa		13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	USP15	Q9Y4E8	981 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DDN	O94850	711 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	OAS1	P00973	400 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IL1R2	P27930	398 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CWF19L1	Q69YN2	538 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SMYD5	Q6GMV2	418 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ZBED8	Q8IZ13	594 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TMEM130	Q8N3G9	435 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	EMC1	Q8N766	993 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ACTL9	Q8TC94	416 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FNIP1	Q8TF40	1166 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MAML1	Q92585	1016 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FAM167B	Q9BTA0	163 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SMYD3	Q9H7B4	428 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SHOC2	Q9UQ13	582 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DNAJC25-GNG10	A0A024R161	153 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GPR25	O00155	361 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CXCL11	O14625	94 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CST8	O60676	142 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ITGB3	P05106	788 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CCND1	P24385	295 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IGBP1	P78318	339 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	OTUD4	Q01804	1114 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	R3HDM1	Q15032	1099 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FAM133B	Q5BKY9	247 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PPP1R21	Q6ZMI0	780 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CAPN12	Q6ZSI9	719 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CENPU	Q71F23	418 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MFN1	Q8IWA4	741 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KIAA0319L	Q8IZA0	1049 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TGS1	Q96RS0	853 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SDCBP2	Q9H190	292 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	VPS37B	Q9H9H4	285 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	METTL5	Q9NRN9	209 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ZFAT	Q9P243	1243 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	EFR3B	Q9Y2G0	817 aa		13.87	□□□□□ -0.19
CSNK1D-222	ENST00000584377	LACTBL1	A8MY62	500 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	POC1B-GALNT4	F8VUJ3	575 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NDC80	O14777	642 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CSDE1	O75534	798 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SUN1	O94901	812 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	STAG3L1	P0CL83	205 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	XYLT1	Q86Y38	959 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SLC4A11	Q8NBS3	891 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TWNK	Q96RR1	684 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RNPEP	Q9H4A4	650 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PDGFC	Q9NRA1	345 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ADARB2	Q9NS39	739 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ABCF3	Q9NUQ8	709 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	WDR35	Q9P2L0	1181 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	HMGXB4	Q9UGU5	601 aa		13.86	□□□□□ -0.19

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