RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 RNF19BQ6ZMZ0 732 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 LINC00301Q8NCQ3 95 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 SENP8Q96LD8 212 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 STRA6Q9BX79 667 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 LRRC27Q9C0I9 530 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 FSCN3Q9NQT6 498 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 ASAH2Q9NR71 780 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 MBD1Q9UIS9 605 aaPredicted RBP12.01□□□□□ -0.49
CCDC47-206ENST00000584112 TIMM13Q9Y5L4 95 aaPredicted RBP12.01□□□□□ -0.49
CCDC47-206ENST00000584112 PTPRDP23468 1912 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 ANAPC1Q9H1A4 1944 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 ANO9A1A5B4 782 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 FRMD3A2A2Y4 597 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TRABD2BA6NFA1 517 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 PIRO00625 290 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 PPEF2O14830 753 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 SPTLC2O15270 562 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 CEBPBP17676 345 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 GDI1P31150 447 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TAF6P49848 677 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TWF1Q12792 350 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 GPR17Q13304 367 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 C4orf17Q53FE4 359 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TAF1BQ53T94 588 aaPredicted RBP12□□□□□ -0.49
CCDC47-206ENST00000584112 PRSS36Q5K4E3 855 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TXNDC11Q6PKC3 985 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 STXBP4Q6ZWJ1 553 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 CCDC65Q8IXS2 484 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 SYCP3Q8IZU3 236 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 PDILTQ8N807 584 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 ELSPBP1Q96BH3 223 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 PANK2Q9BZ23 570 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TNMDQ9H2S6 317 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 CUEDC2Q9H467 287 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 PANK4Q9NVE7 773 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 DPP3Q9NY33 737 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 TBC1D7Q9P0N9 293 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 IL17BQ9UHF5 180 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 DSEQ9UL01 958 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 YIPF1Q9Y548 306 aa12□□□□□ -0.49
CCDC47-206ENST00000584112 A0A087X0B3 334 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 UPK3BL1B0FP48 263 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 UPK3BL2E5RIL1 263 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 YEATS4O95619 227 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 CYP11A1P05108 521 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 GARTP22102 1010 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 ADSSP30520 456 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 ALDH1A3P47895 512 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 EPHB3P54753 998 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 EPHA5P54756 1037 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 AMPD3Q01432 767 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 SV2CQ496J9 727 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 CRELD2Q6UXH1 353 aaPredicted RBP11.99□□□□□ -0.49
CCDC47-206ENST00000584112 CYP2U1Q7Z449 544 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 METTL23Q86XA0 190 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 TMEM130Q8N3G9 435 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 ZNF560Q96MR9 790 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 TRMT61BQ9BVS5 477 aaKnown RBP11.99□□□□□ -0.49
CCDC47-206ENST00000584112 TMEM206Q9H813 350 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 ZFP14Q9HCL3 533 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 CEP72Q9P209 647 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
CCDC47-206ENST00000584112 HELZP42694 1942 aaKnown RBP11.99□□□□□ -0.49
CCDC47-206ENST00000584112 LRBAP50851 2863 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 KIAA0391O15091 583 aaKnown RBP11.98□□□□□ -0.49
CCDC47-206ENST00000584112 CUTAO60888 179 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 OR4Q2P0C623 313 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 MYL4P12829 197 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 ENGP17813 658 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 GBP1P32455 592 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 EIF2S3P41091 472 aaKnown RBP11.98□□□□□ -0.49
CCDC47-206ENST00000584112 PNPLA4P41247 253 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 KCNA1Q09470 495 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 DUSP4Q13115 394 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 LY6DQ14210 128 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 GPR155Q7Z3F1 870 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 EFCAB13Q8IY85 973 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 THEM5Q8N1Q8 247 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 CACTINQ8WUQ7 758 aaKnown RBP11.98□□□□□ -0.49
CCDC47-206ENST00000584112 PIGKQ92643 395 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 TCEAL4Q96EI5 215 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 PGLYRP2Q96PD5 576 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 PYM1Q9BRP8 204 aaKnown RBP11.98□□□□□ -0.49
CCDC47-206ENST00000584112 FAM213AQ9BRX8 229 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 GPR88Q9GZN0 384 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 ASB3Q9Y575 518 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
CCDC47-206ENST00000584112 CACNA1DQ01668 2161 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 TEX51A0A1B0GUA7 166 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 MTMR11A4FU01 709 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 SLC38A8A6NNN8 435 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 CYB561D2O14569 222 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 VNN2O95498 520 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 FGF19O95750 216 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
CCDC47-206ENST00000584112 CCR2P41597 374 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms