RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 SPATA2LQ8IUW3 424 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CCAR2Q8N163 923 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 FBXO22Q8NEZ5 403 aa17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 IPO4Q8TEX9 1081 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 STK32AQ8WU08 396 aa17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 VCPIP1Q96JH7 1222 aa17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MRPL17Q9NRX2 175 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 TMLHEQ9NVH6 421 aa17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
CDK5RAP3-230ENST00000584042 TMCO5BA8MYB1 307 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CLDN5O00501 218 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 FTLP02792 175 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CALB1P05937 261 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PBX2P40425 430 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MAGEA11P43364 429 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 GALCP54803 685 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ROR1Q01973 937 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PDE4CQ08493 712 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PTPN20Q4JDL3 420 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RSPO2Q6UXX9 243 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CLEC20AQ6ZU45 233 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 WDTC1Q8N5D0 677 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 UBA3Q8TBC4 463 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SLC35F5Q8WV83 523 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CPA5Q8WXQ8 436 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CTNNBL1Q8WYA6 563 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PACSIN1Q9BY11 444 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MIS12Q9H081 205 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RXFP1Q9HBX9 757 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CSNK1G1Q9HCP0 422 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 FNIP2Q9P278 1114 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PCDHB5Q9Y5E4 795 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 IRAK3Q9Y616 596 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CDY1Q9Y6F8 540 aa17.68■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MTMR11A4FU01 709 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 BTNL10A8MVZ5 291 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 C2CD2LO14523 706 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 LILRB3O75022 631 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 AP1G2O75843 785 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RPL34P49207 117 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PTP4A2Q12974 167 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 VSTM1Q6UX27 236 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MMS22LQ6ZRQ5 1243 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MCOLN2Q8IZK6 566 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ZNF653Q96CK0 615 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PPP1R13BQ96KQ4 1090 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 HSFY1Q96LI6 401 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 C11orf70Q9BRQ4 267 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 DMAP1Q9NPF5 467 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 AVENQ9NQS1 362 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 TLR9Q9NR96 1032 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ADAM22Q9P0K1 906 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CYTH4Q9UIA0 394 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 STRIP2Q9ULQ0 834 aa17.67■□□□□ 0.42
CDK5RAP3-230ENST00000584042 A0A0A6YYK5 440 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 WDR27A2RRH5 827 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RCCD1A6NED2 376 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 DNAJB2P25686 324 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ARHGAP25P42331 645 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 GABRB2P47870 512 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 NDUFV1P49821 464 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SNX16P57768 344 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SMAD3P84022 425 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 KIF5AQ12840 1032 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ARHGAP29Q52LW3 1261 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 LIN9Q5TKA1 542 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PPP2R2DQ66LE6 453 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 TPGS2Q68CL5 300 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SPRED2Q7Z698 418 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ERICH1Q86X53 443 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 REXO1L1PQ8IX06 675 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SPPL3Q8TCT6 385 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 POF1BQ8WVV4 589 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 KCTD13Q8WZ19 329 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RFFLQ8WZ73 363 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CPXM1Q96SM3 734 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SMOQ99835 787 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 CLSTN3Q9BQT9 956 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 SLC4A5Q9BY07 1137 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ENTPD7Q9NQZ7 604 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ABI2Q9NYB9 513 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 HSFX1Q9UBD0 423 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ATG2AQ2TAZ0 1938 aa17.66■□□□□ 0.42
CDK5RAP3-230ENST00000584042 A0A1W2PPC1 479 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 USP27XA6NNY8 438 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 H3BNC9 293 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 FSCN2O14926 492 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 TRIM66O15016 1216 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ADAM12O43184 909 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 KRT86O43790 486 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RPL17P18621 184 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ABCB4P21439 1286 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 BDNFP23560 247 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ACADSBP45954 432 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 RAB33AQ14088 237 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms