RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CHD8Q9HCK8 2581 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 IL18RAPO95256 599 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 F11P03951 625 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 WEE1P30291 646 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 TSPY1Q01534 308 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 STK4Q13043 487 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 ALCAMQ13740 583 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 DDR2Q16832 855 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 INTS6LQ5JSJ4 861 aaKnown RBP16.79■□□□□ 0.28
SKA2-209ENST00000583976 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 CEP68Q76N32 757 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 NELFCDQ8IXH7 590 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 TTC16Q8NEE8 873 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 SLC22A12Q96S37 553 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 PKMYT1Q99640 499 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 MTMR12Q9C0I1 747 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
SKA2-209ENST00000583976 SIX4Q9UIU6 781 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 AGAP1Q9UPQ3 857 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 EXOC7Q9UPT5 735 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
SKA2-209ENST00000583976 MAP1BP46821 2468 aaKnown RBP16.78■□□□□ 0.28
SKA2-209ENST00000583976 SMC2O95347 1197 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 EGFP01133 1207 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 CYP2F1P24903 491 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 AVPR1AP37288 418 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 PSMD2Q13200 908 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 RUNX3Q13761 415 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 TMEM196Q5HYL7 178 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 ISM2Q6H9L7 571 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 WDR5BQ86VZ2 330 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 DCP1BQ8IZD4 617 aaKnown RBP16.78■□□□□ 0.28
SKA2-209ENST00000583976 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 NETO1Q8TDF5 533 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 SCFD1Q8WVM8 642 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 TMEM206Q9H813 350 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 FBRSL1Q9HCM7 1045 aaKnown RBP16.78■□□□□ 0.28
SKA2-209ENST00000583976 TRPC7Q9HCX4 862 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 PTPRDP23468 1912 aa16.78■□□□□ 0.28
SKA2-209ENST00000583976 SLC30A4O14863 429 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.28
SKA2-209ENST00000583976 LRP3O75074 770 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 RNF40O75150 1001 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 RHOBTB3O94955 611 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 SDHBP21912 280 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 KCNA4P22459 653 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 PNPLA4P41247 253 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 SF3A2Q15428 464 aaKnown RBP16.77■□□□□ 0.28
SKA2-209ENST00000583976 CSRP2Q16527 193 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 PPM1JQ5JR12 505 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 EPM2AIP1Q7L775 607 aaPredicted RBP16.77■□□□□ 0.28
SKA2-209ENST00000583976 ELOA2Q8IYF1 753 aaPredicted RBP16.77■□□□□ 0.28
SKA2-209ENST00000583976 ADGRF2Q8IZF7 708 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 ZNF507Q8TCN5 953 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 MRPS31Q92665 395 aaKnown RBP16.77■□□□□ 0.28
SKA2-209ENST00000583976 EZH1Q92800 747 aaPredicted RBP16.77■□□□□ 0.28
SKA2-209ENST00000583976 HHIPQ96QV1 700 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 PCIF1Q9H4Z3 704 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 PDE11AQ9HCR9 933 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 RXFP3Q9NSD7 469 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 THG1LQ9NWX6 298 aaKnown RBP16.77■□□□□ 0.28
SKA2-209ENST00000583976 GTF3C4Q9UKN8 822 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 MAPK8IP1Q9UQF2 711 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 SNX9Q9Y5X1 595 aa16.77■□□□□ 0.28
SKA2-209ENST00000583976 NOL4O94818 638 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 KRT19P08727 400 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 HOXD13P35453 343 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 PSMC1P62191 440 aaKnown RBP16.76■□□□□ 0.27
SKA2-209ENST00000583976 POU5F1Q01860 360 aaKnown RBP16.76■□□□□ 0.27
SKA2-209ENST00000583976 SMARCB1Q12824 385 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 USP4Q13107 963 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 KCNB1Q14721 858 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 MTF1Q14872 753 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 ZNF77Q15935 545 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 KBTBD6Q86V97 674 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 SMYD4Q8IYR2 804 aaPredicted RBP16.76■□□□□ 0.27
SKA2-209ENST00000583976 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 GSDMAQ96QA5 445 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 SMOC1Q9H4F8 434 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 KIF9Q9HAQ2 790 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 TDP1Q9NUW8 608 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 RMND1Q9NWS8 449 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 WNT6Q9Y6F9 365 aa16.76■□□□□ 0.27
SKA2-209ENST00000583976 BIN1O00499 593 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 HUS1O60921 280 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 ATP2C2O75185 946 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 CSH1P0DML2 217 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 CSH2P0DML3 217 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 DDX6P26196 483 aaKnown RBP eCLIP16.75■□□□□ 0.27
SKA2-209ENST00000583976 CNR2P34972 360 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 NFE2Q16621 373 aaPredicted RBP16.75■□□□□ 0.27
SKA2-209ENST00000583976 MON1AQ86VX9 555 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 SYNPOQ8N3V7 929 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 CSGALNACT2Q8N6G5 542 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 LRRC52Q8N7C0 313 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
SKA2-209ENST00000583976 GAB3Q8WWW8 586 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms